RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 C5orf17Q8NAS9 161 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 TVP23CQ96ET8 276 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 TMEM167BQ9NRX6 74 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 TP53TG3Q9ULZ0 132 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 SPINK4O60575 86 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GAGE7O76087 117 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 IGLV2-11P01706 119 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 TCRAP04437 139 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GAGE12FP0CL80 117 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GAGE12GP0CL81 117 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GAGE12IP0CL82 117 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GNG5P63218 68 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 LGALS9BQ3B8N2 356 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 TDRG1Q3Y452 100 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 KLF12Q9Y4X4 402 aa7.79□□□□□ -1.16
COL4A6-205ENST00000468338 HOXA5P20719 270 aa7.78□□□□□ -1.16
COL4A6-205ENST00000468338 EPDR1Q9UM22 224 aa7.78□□□□□ -1.16
COL4A6-205ENST00000468338 DNAH2Q9P225 4427 aa7.78□□□□□ -1.16
COL4A6-205ENST00000468338 DNAH17Q9UFH2 4485 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 A0A0D9SG52 128 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 H3BNG1 76 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 Q6ZR54 194 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 TREM1Q9NP99 234 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
COL4A6-205ENST00000468338 FBLL1A6NHQ2 334 aaKnown RBP7.76□□□□□ -1.17
COL4A6-205ENST00000468338 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
COL4A6-205ENST00000468338 MUC21Q5SSG8 566 aa7.76□□□□□ -1.17
COL4A6-205ENST00000468338 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
COL4A6-205ENST00000468338 TMPRSS5Q9H3S3 457 aa7.76□□□□□ -1.17
COL4A6-205ENST00000468338 MDFICQ9P1T7 246 aa7.76□□□□□ -1.17
COL4A6-205ENST00000468338 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 TRGV1A0A0A0MS02 117 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 TRAV21A0A0B4J279 112 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 GAGE10A6NGK3 116 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 FAM74A7A6NL05 159 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 OR5I1Q13606 314 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 FAM159AQ6UWV7 190 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 Q6ZNX1 250 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 RASL10AQ92737 203 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 SGK494Q96LW2 274 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 NKX6-2Q9C056 277 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-205ENST00000468338 PSG8Q9UQ74 426 aa7.75□□□□□ -1.17
COL4A6-205ENST00000468338 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 TRGV2A0A075B6R0 118 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 UMAD1C9J7I0 102 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 K7EQM0 130 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 BCL2L11O43521 198 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 NUDT3O95989 172 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 FHITP49789 147 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
COL4A6-205ENST00000468338 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
COL4A6-205ENST00000468338 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
COL4A6-205ENST00000468338 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 UBE2DNLQ8IWF7 75 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 TMEM183AQ8IXX5 376 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 ZNRF2Q8NHG8 242 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 MBD3L1Q8WWY6 194 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 SPXQ9BT56 116 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
COL4A6-205ENST00000468338 F6UZH7 168 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 GNRH2O43555 120 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 CCL18P55774 89 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 SAPCD1Q5SSQ6 148 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 IQCF2Q8IXL9 164 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 TCTE3Q8IZS6 198 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 LINC00479Q96M42 142 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 NDFIP1Q9BT67 221 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 ZNF471Q9BX82 626 aaPredicted RBP7.73□□□□□ -1.17
COL4A6-205ENST00000468338 MRPL16Q9NX20 251 aaKnown RBP7.73□□□□□ -1.17
COL4A6-205ENST00000468338 C11orf21Q9P2W6 132 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
COL4A6-205ENST00000468338 A0A0J9YY99 117 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 KANTRA0A1W2PQU2 76 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 PEX7O00628 323 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 GCGP01275 180 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 TYMSP04818 313 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 PFN1P07737 140 aaKnown RBP7.72□□□□□ -1.17
COL4A6-205ENST00000468338 UBE2G2P60604 165 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 FHL2Q14192 279 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 TMUB2Q71RG4 321 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 COX8CQ7Z4L0 72 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 STOML3Q8TAV4 291 aa7.72□□□□□ -1.17
COL4A6-205ENST00000468338 KCNS1Q96KK3 526 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms