RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 IBA57Q5T440 356 aaKnown RBP10.95□□□□□ -0.66
SNIP1-202ENST00000468040 DAZAP1Q96EP5 407 aaKnown RBP10.95□□□□□ -0.66
SNIP1-202ENST00000468040 NAT8Q9UHE5 227 aa10.95□□□□□ -0.66
SNIP1-202ENST00000468040 PRKDCP78527 4128 aaKnown RBP10.94□□□□□ -0.66
SNIP1-202ENST00000468040 A0A0J9YWU9 116 aa10.94□□□□□ -0.66
SNIP1-202ENST00000468040 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
SNIP1-202ENST00000468040 LINC01551Q86U37 167 aa10.94□□□□□ -0.66
SNIP1-202ENST00000468040 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
SNIP1-202ENST00000468040 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 B4DEV8 164 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 K7EN84 100 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 M0R036 132 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 DEFB4AO15263 64 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 TYMSP04818 313 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 EMP1P54849 157 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 TP53TG3Q9ULZ0 132 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 NBEAL2Q6ZNJ1 2754 aa10.93□□□□□ -0.66
SNIP1-202ENST00000468040 TEX48A0A1B0GUV7 120 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 PLAC8L1A1L4L8 177 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 TMEM218A2RU14 115 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 KRBOX1C9JBD0 128 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 P01737 135 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 TCL1AP56279 114 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 OR5I1Q13606 314 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 C11orf72Q8NBR9 251 aa10.92□□□□□ -0.66
SNIP1-202ENST00000468040 TIMM8BQ9Y5J9 83 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-202ENST00000468040 GNRH2O43555 120 aa10.91□□□□□ -0.66
SNIP1-202ENST00000468040 ASIPP42127 132 aa10.91□□□□□ -0.66
SNIP1-202ENST00000468040 GSN-AS1Q9NRJ2 163 aa10.91□□□□□ -0.66
SNIP1-202ENST00000468040 DNAH9Q9NYC9 4486 aa10.91□□□□□ -0.66
SNIP1-202ENST00000468040 IGHV3-16A0A0C4DH30 117 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 CXCL1P09341 107 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 SPART-AS1P0CW21 52 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.66
SNIP1-202ENST00000468040 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
SNIP1-202ENST00000468040 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
SNIP1-202ENST00000468040 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
SNIP1-202ENST00000468040 ADIRFQ15847 76 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 EDA2RQ9HAV5 297 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 MDFICQ9P1T7 246 aa10.9□□□□□ -0.66
SNIP1-202ENST00000468040 TMSB15BA0A087X1C1 80 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 XKRY2A2RUG3 117 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 F8W036 122 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 PNRC1Q12796 327 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-202ENST00000468040 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 FAM222AQ5U5X8 452 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 IL17DQ8TAD2 202 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 SPXQ9BT56 116 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 RNASE7Q9H1E1 156 aaKnown RBP10.89□□□□□ -0.67
SNIP1-202ENST00000468040 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
SNIP1-202ENST00000468040 NOP10Q9NPE3 64 aaKnown RBP10.89□□□□□ -0.67
SNIP1-202ENST00000468040 DKK2Q9UBU2 259 aa10.89□□□□□ -0.67
SNIP1-202ENST00000468040 CXorf65A6NEN9 183 aa10.88□□□□□ -0.67
SNIP1-202ENST00000468040 RPL19P84098 196 aaKnown RBP10.88□□□□□ -0.67
SNIP1-202ENST00000468040 C15orf54Q8N8G6 183 aa10.88□□□□□ -0.67
SNIP1-202ENST00000468040 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
SNIP1-202ENST00000468040 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
SNIP1-202ENST00000468040 IL36BQ9NZH7 164 aa10.88□□□□□ -0.67
SNIP1-202ENST00000468040 HUWE1Q7Z6Z7 4374 aaKnown RBP10.88□□□□□ -0.67
SNIP1-202ENST00000468040 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 NDUFA5Q16718 116 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 LGALS9BQ3B8N2 356 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 COL7A1Q02388 2944 aa10.87□□□□□ -0.67
SNIP1-202ENST00000468040 M0R2P5 195 aa10.86□□□□□ -0.67
SNIP1-202ENST00000468040 GATCO43716 136 aaKnown RBP10.86□□□□□ -0.67
SNIP1-202ENST00000468040 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
SNIP1-202ENST00000468040 RNASE3P12724 160 aaKnown RBP10.86□□□□□ -0.67
SNIP1-202ENST00000468040 CT83Q5H943 113 aa10.86□□□□□ -0.67
SNIP1-202ENST00000468040 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
SNIP1-202ENST00000468040 CELA1Q9UNI1 258 aa10.86□□□□□ -0.67
SNIP1-202ENST00000468040 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
SNIP1-202ENST00000468040 H3BVH4 76 aa10.85□□□□□ -0.67
SNIP1-202ENST00000468040 SPINK4O60575 86 aa10.85□□□□□ -0.67
SNIP1-202ENST00000468040 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
SNIP1-202ENST00000468040 ZNF575Q86XF7 245 aa10.85□□□□□ -0.67
SNIP1-202ENST00000468040 A8MWL6 223 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 DAD1P61803 113 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 Q6ZTI0 123 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 OR10G8Q8NGN5 311 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 RASL10AQ92737 203 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 PTH2Q96A98 100 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
SNIP1-202ENST00000468040 A0A1W2PPQ1 181 aa10.83□□□□□ -0.68
SNIP1-202ENST00000468040 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms