RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 DLX6P56179 175 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 PRB3Q04118 309 aaPredicted RBP8.59□□□□□ -1.03
SFXN3-204ENST00000466982 ZNF575Q86XF7 245 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
SFXN3-204ENST00000466982 MZT1Q08AG7 82 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 OR11H6Q8NGC7 330 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 Q8TAT8 98 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 TMEM14CQ9P0S9 112 aa8.59□□□□□ -1.03
SFXN3-204ENST00000466982 MAP1BP46821 2468 aaKnown RBP8.59□□□□□ -1.03
SFXN3-204ENST00000466982 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
SFXN3-204ENST00000466982 TRBV6-1A0A0K0K1D8 114 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 TCL1BO95988 128 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
SFXN3-204ENST00000466982 DLX1P56177 255 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 TEX36Q5VZQ5 186 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 Q5XG85 94 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 TIMD4Q96H15 378 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 PRO0628Q9UI54 55 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 PTPRZ1P23471 2315 aaPredicted RBP8.58□□□□□ -1.04
SFXN3-204ENST00000466982 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 IGLV1-44P01699 117 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 MALP21145 153 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 LINC00574Q9H8X3 128 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 S4R3C0 116 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 PKDREJQ9NTG1 2253 aa8.58□□□□□ -1.04
SFXN3-204ENST00000466982 ATP1A1-AS1Q5TC04 95 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 MDS2Q8NDY4 140 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 RNF7Q9UBF6 113 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 MALRD1Q5VYJ5 2156 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 TRAV8-4A0A0B4J246 113 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 LINC01549A6NIU2 74 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 LINC01619G3V211 115 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 IGKV1-17P01599 117 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 EFNA4P52798 201 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 IGFL4Q6B9Z1 124 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 C9orf106Q8NAJ2 232 aa8.57□□□□□ -1.04
SFXN3-204ENST00000466982 TRBV7-7A0A0K0K1E9 115 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 RPL27AP46776 148 aaKnown RBP8.56□□□□□ -1.04
SFXN3-204ENST00000466982 DEFB124Q8NES8 71 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 ZNF292O60281 2723 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 ATP5LO75964 103 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 IGFBPL1Q8WX77 278 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 SHANK2-AS3Q9BTD1 123 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 SCNM1Q9BWG6 230 aa8.56□□□□□ -1.04
SFXN3-204ENST00000466982 M0R1B8 84 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 TMEM200BQ69YZ2 307 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 Q8N1Y9 231 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 LAMA5O15230 3695 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 GVINP1Q7Z2Y8 2422 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 WNK2Q9Y3S1 2297 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 SLC25A20O43772 301 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
SFXN3-204ENST00000466982 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 GAGE2AQ6NT46 116 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 RNF125Q96EQ8 232 aa8.55□□□□□ -1.04
SFXN3-204ENST00000466982 NCBP2LA6PVI3 153 aaKnown RBP8.54□□□□□ -1.04
SFXN3-204ENST00000466982 K7EM74 188 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 TIMM23O14925 209 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
SFXN3-204ENST00000466982 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 NXT2Q9NPJ8 142 aaKnown RBP8.54□□□□□ -1.04
SFXN3-204ENST00000466982 MGAQ8IWI9 3026 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 CEP250Q9BV73 2442 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 H3BRN7 92 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 IGHV1-46P01743 117 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 WT1P19544 449 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-204ENST00000466982 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
SFXN3-204ENST00000466982 CNOT1A5YKK6 2376 aaKnown RBP8.53□□□□□ -1.04
SFXN3-204ENST00000466982 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
SFXN3-204ENST00000466982 CCL8P80075 99 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 DTX2Q86UW9 622 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 KLK15Q9H2R5 256 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 V9GYY9 64 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 A0A1W2PNU3 283 aaPredicted RBP8.53□□□□□ -1.04
SFXN3-204ENST00000466982 I3L2K1 104 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 TRGV3P03979 118 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 LGALS1P09382 135 aaKnown RBP8.53□□□□□ -1.04
SFXN3-204ENST00000466982 CCL11P51671 97 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 TMEM155Q4W5P6 130 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 ZNF491Q8N8L2 437 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 MYOZ3Q8TDC0 251 aa8.53□□□□□ -1.04
SFXN3-204ENST00000466982 TEX22C9J3V5 150 aa8.52□□□□□ -1.05
SFXN3-204ENST00000466982 OVOL1O14753 267 aa8.52□□□□□ -1.05
SFXN3-204ENST00000466982 OXTP01178 125 aa8.52□□□□□ -1.05
SFXN3-204ENST00000466982 UBE2D1P51668 147 aa8.52□□□□□ -1.05
SFXN3-204ENST00000466982 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
SFXN3-204ENST00000466982 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms