RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 OR10J6PQ8NGY7 276 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 NAT8Q9UHE5 227 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 IGKV1OR2-108A0A075B7D4 117 aa9.89□□□□□ -0.83
CXCR4-203ENST00000466288 MT-ND4LP03901 98 aa9.89□□□□□ -0.83
CXCR4-203ENST00000466288 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
CXCR4-203ENST00000466288 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
CXCR4-203ENST00000466288 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
CXCR4-203ENST00000466288 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
CXCR4-203ENST00000466288 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
CXCR4-203ENST00000466288 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 PAGE4O60829 102 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 DNAH10OSP0CZ25 163 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 GCHFRP30047 84 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 PLP1P60201 277 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 RNF182Q8N6D2 247 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
CXCR4-203ENST00000466288 TNFRSF18Q9Y5U5 241 aa9.88□□□□□ -0.83
CXCR4-203ENST00000466288 FAT3Q8TDW7 4589 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 A0A087WTM6 91 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 HAMPP81172 84 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 RPUSD4Q96CM3 377 aaKnown RBP9.87□□□□□ -0.83
CXCR4-203ENST00000466288 SMIM7Q9BQ49 75 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
CXCR4-203ENST00000466288 A0A096LPF7 62 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 A0A1W2PRE2 83 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 CBLN2Q8IUK8 224 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 IQCF2Q8IXL9 164 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 TMPRSS5Q9H3S3 457 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 RNF24Q9Y225 148 aa9.86□□□□□ -0.83
CXCR4-203ENST00000466288 COLCA2A8K830 154 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 SIVA1O15304 175 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
CXCR4-203ENST00000466288 COX7A2P2O60397 106 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 CEBPGP53567 150 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 C10orf113Q5VZT2 155 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 OR1B1Q8NGR6 318 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 C11orf52Q96A22 123 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 LY96Q9Y6Y9 160 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GAGE12BA1L429 117 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GAGE7O76087 117 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 GCSHP23434 173 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 FLI1Q01543 452 aaPredicted RBP9.85□□□□□ -0.83
CXCR4-203ENST00000466288 HIST1H1AQ02539 215 aaPredicted RBP9.85□□□□□ -0.83
CXCR4-203ENST00000466288 CST9LP1Q5W188 147 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 OR8A1Q8NGG7 326 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 ANAPC16Q96DE5 110 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 VSIG2Q96IQ7 327 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 PARLQ9H300 379 aa9.85□□□□□ -0.83
CXCR4-203ENST00000466288 KRTAP29-1A8MX34 341 aaPredicted RBP9.84□□□□□ -0.83
CXCR4-203ENST00000466288 H7BYZ3 331 aa9.84□□□□□ -0.83
CXCR4-203ENST00000466288 S100A7P31151 101 aa9.84□□□□□ -0.83
CXCR4-203ENST00000466288 MIR17HGQ75NE6 70 aa9.84□□□□□ -0.83
CXCR4-203ENST00000466288 BTF3L4Q96K17 158 aa9.84□□□□□ -0.83
CXCR4-203ENST00000466288 GPR82Q96P67 336 aa9.84□□□□□ -0.83
CXCR4-203ENST00000466288 PPP1R2P9O14990 202 aa9.83□□□□□ -0.84
CXCR4-203ENST00000466288 HYPMO75409 117 aa9.83□□□□□ -0.84
CXCR4-203ENST00000466288 CDKN1BP46527 198 aa9.83□□□□□ -0.84
CXCR4-203ENST00000466288 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
CXCR4-203ENST00000466288 TMEM37Q8WXS4 190 aa9.83□□□□□ -0.84
CXCR4-203ENST00000466288 C9JCJ5 164 aa9.82□□□□□ -0.84
CXCR4-203ENST00000466288 OR7C2O60412 319 aa9.82□□□□□ -0.84
CXCR4-203ENST00000466288 PRB4P10163 310 aaPredicted RBP9.82□□□□□ -0.84
CXCR4-203ENST00000466288 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
CXCR4-203ENST00000466288 HIST1H2BAQ96A08 127 aa9.82□□□□□ -0.84
CXCR4-203ENST00000466288 PPP1R14DQ9NXH3 145 aa9.82□□□□□ -0.84
CXCR4-203ENST00000466288 NXPH4O95158 308 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 ORM2P19652 201 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
CXCR4-203ENST00000466288 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 FAM167A-AS1Q96KT0 104 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 IMMP2LQ96T52 175 aa9.81□□□□□ -0.84
CXCR4-203ENST00000466288 LOC105371267A0A1B0GV96 52 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 C1orf196B1AJZ1 125 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 UBE2G2P60604 165 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 RAB5BP61020 215 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
CXCR4-203ENST00000466288 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 TMEM70Q9BUB7 260 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
CXCR4-203ENST00000466288 NDUFB4O95168 129 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 RAB5AP20339 215 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 S100PP25815 95 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 PSG3Q16557 428 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 ZNF674Q2M3X9 581 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 PATE2Q6UY27 113 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 LINC00305Q7Z4B0 112 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms