RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ATOH7Q8N100 152 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 OR1N2Q8NGR9 330 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 RAX2Q96IS3 184 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 TMEM191AQ9H0A3 160 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 HSPB8Q9UJY1 196 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 FAM106AQ4KMX7 169 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 ZNF493Q6ZR52 646 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 CLEC5AQ9NY25 188 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 TSSC4Q9Y5U2 329 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-209ENST00000466222 U3KQE9 123 aa14.11□□□□□ -0.15
CAPN3-209ENST00000466222 ADARB2-AS1A8MUL3 147 aa14.1□□□□□ -0.15
CAPN3-209ENST00000466222 LINC01619G3V211 115 aa14.1□□□□□ -0.15
CAPN3-209ENST00000466222 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
CAPN3-209ENST00000466222 SAPCD1Q5SSQ6 148 aa14.1□□□□□ -0.15
CAPN3-209ENST00000466222 GOLT1BQ9Y3E0 138 aa14.1□□□□□ -0.15
CAPN3-209ENST00000466222 OR4C46A6NHA9 309 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 ARMS2P0C7Q2 107 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 IGLL1P15814 213 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 MAP1LC3CQ9BXW4 147 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 TMEM213A2RRL7 107 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 KRTAP24-1Q3LI83 254 aa14.09□□□□□ -0.15
CAPN3-209ENST00000466222 DLX4Q92988 240 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-209ENST00000466222 DAZ1Q9NQZ3 744 aaKnown RBP14.09□□□□□ -0.15
CAPN3-209ENST00000466222 CRIP1P50238 77 aa14.08□□□□□ -0.16
CAPN3-209ENST00000466222 RPS20P60866 119 aaKnown RBP14.08□□□□□ -0.16
CAPN3-209ENST00000466222 WFDC12Q8WWY7 111 aa14.08□□□□□ -0.16
CAPN3-209ENST00000466222 DPF1Q92782 380 aa14.08□□□□□ -0.16
CAPN3-209ENST00000466222 MAJINQ3KP22 176 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 IGHV7-4-1A0A0J9YVY3 117 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 M0QZ24 198 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 CCL24O00175 119 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 IGFL4Q6B9Z1 124 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 SPATA12Q7Z6I5 190 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 RHPN1-AS1Q9BWJ2 59 aa14.07□□□□□ -0.16
CAPN3-209ENST00000466222 VWFP04275 2813 aa14.06□□□□□ -0.16
CAPN3-209ENST00000466222 HSBP1L1C9JCN9 74 aa14.06□□□□□ -0.16
CAPN3-209ENST00000466222 M0R3E3 92 aa14.06□□□□□ -0.16
CAPN3-209ENST00000466222 ADAMTSL5Q6ZMM2 481 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 STPG4Q8N801 248 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 MS4A6AQ9H2W1 248 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 AP5S1Q9NUS5 200 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 SMPXQ9UHP9 88 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 UFC1Q9Y3C8 167 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 TRRAPQ9Y4A5 3859 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 IGKV3-7A0A075B6H7 116 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 BMI1P35226 326 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 FA2HQ7L5A8 372 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 GLMPQ8WWB7 406 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 C8orf49Q96NF6 230 aa14.05□□□□□ -0.16
CAPN3-209ENST00000466222 K7EMT4 169 aa14.04□□□□□ -0.16
CAPN3-209ENST00000466222 FHL3Q13643 280 aa14.04□□□□□ -0.16
CAPN3-209ENST00000466222 ORAOV1Q8WV07 137 aa14.04□□□□□ -0.16
CAPN3-209ENST00000466222 U3KQK5 164 aa14.04□□□□□ -0.16
CAPN3-209ENST00000466222 LGALS9O00182 355 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 SH2D1AO60880 128 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 OR10AG1Q8NH19 301 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 WNK1Q9H4A3 2382 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 HLA-DMBP28068 263 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 TFPI2P48307 235 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 PRR25Q96S07 402 aa14.03□□□□□ -0.16
CAPN3-209ENST00000466222 RPL11P62913 178 aaKnown RBP14.02□□□□□ -0.16
CAPN3-209ENST00000466222 LINC01545Q5VT33 79 aa14.02□□□□□ -0.16
CAPN3-209ENST00000466222 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.16
CAPN3-209ENST00000466222 PRSS3P2Q8NHM4 247 aa14.02□□□□□ -0.16
CAPN3-209ENST00000466222 A0A087X0K7 114 aa14.02□□□□□ -0.17
CAPN3-209ENST00000466222 FAM104BQ5XKR9 115 aa14.02□□□□□ -0.17
CAPN3-209ENST00000466222 LYZL1Q6UWQ5 148 aa14.02□□□□□ -0.17
CAPN3-209ENST00000466222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.02□□□□□ -0.17
CAPN3-209ENST00000466222 OR9G4Q8NGQ1 327 aa14.02□□□□□ -0.17
CAPN3-209ENST00000466222 NPSP0C0P6 89 aa14.01□□□□□ -0.17
CAPN3-209ENST00000466222 CSN3P07498 182 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 HINT1P49773 126 aaPredicted RBP14□□□□□ -0.17
CAPN3-209ENST00000466222 ZNF138P52744 262 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 SLC25A34Q6PIV7 304 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 NDUFA11Q86Y39 141 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 ORMDL3Q8N138 153 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 ZNF747Q9BV97 191 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 RNF182Q8N6D2 247 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 PMCHL2Q9BQD1 86 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 TPPP3Q9BW30 176 aa14□□□□□ -0.17
CAPN3-209ENST00000466222 IGKV2-40A0A087WW87 121 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-209ENST00000466222 RBAKDNA6NC62 111 aa13.99□□□□□ -0.17
CAPN3-209ENST00000466222 IGKV2D-40P01614 121 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-209ENST00000466222 CITED1Q99966 193 aa13.99□□□□□ -0.17
CAPN3-209ENST00000466222 SPATA3Q8NHX4 192 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 PRELID3AQ96N28 172 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 ASCL2Q99929 193 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 SLC50A1Q9BRV3 221 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 SCRT2Q9NQ03 307 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 TRAV8-2A0A0B4J237 113 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 hDV102S1A0JD36 115 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 IGLC6P0CF74 106 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 FER1L6-AS1Q8NA97 138 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 ZNF738Q8NE65 137 aa13.98□□□□□ -0.17
CAPN3-209ENST00000466222 D6R8Y8 96 aa13.97□□□□□ -0.17
CAPN3-209ENST00000466222 WFDC3Q8IUB2 231 aa13.97□□□□□ -0.17
CAPN3-209ENST00000466222 COX11Q9Y6N1 276 aa13.97□□□□□ -0.17
CAPN3-209ENST00000466222 PEMTQ9UBM1 199 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms