RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 OR2K2Q8NGT1 345 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 HIST1H4GQ99525 98 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 SHANK2-AS3Q9BTD1 123 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 VSIRQ9H7M9 311 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 ZMAT5Q9UDW3 170 aaKnown RBP3.22□□□□□ -1.89
CDK13-203ENST00000465643 TRAV5A0A0B4J249 113 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 F6UB75 175 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 SERF1AO75920 110 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 MBP02144 154 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 MT3P25713 68 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 GALR1P47211 349 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 APOC4P55056 127 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 RHOBP62745 196 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 C1orf194Q5T5A4 169 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 SPATA31B1PQ5VZV4 182 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 BAP18Q8IXM2 172 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 LRRC20Q8TCA0 184 aa3.22□□□□□ -1.89
CDK13-203ENST00000465643 PSMG3Q9BT73 122 aaPredicted RBP3.22□□□□□ -1.89
CDK13-203ENST00000465643 FAM168BA1KXE4 195 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 OR4C46A6NHA9 309 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 HMGB3O15347 200 aaKnown RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 EIF3GO75821 320 aaKnown RBP eCLIP3.21□□□□□ -1.9
CDK13-203ENST00000465643 CD5P06127 495 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 RPL7P18124 248 aaKnown RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 M6PRP20645 277 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 CDC34P49427 236 aaPredicted RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 SERF2P84101 59 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 EIF5AL1Q6IS14 154 aaKnown RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 IQCF2Q8IXL9 164 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 NKAPP1Q8N9T2 125 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 GPR82Q96P67 336 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 MRPL32Q9BYC8 188 aaKnown RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 ACTR3CQ9C0K3 210 aaPredicted RBP3.21□□□□□ -1.9
CDK13-203ENST00000465643 FUT9Q9Y231 359 aa3.21□□□□□ -1.9
CDK13-203ENST00000465643 OR7C2O60412 319 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 SNAPINO95295 136 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
CDK13-203ENST00000465643 SEC11BP0C7V7 166 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 TAS2R45P59539 299 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 KHDC3LQ587J8 217 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 C9orf129Q5T035 196 aaKnown RBP3.2□□□□□ -1.9
CDK13-203ENST00000465643 BPIFA4PQ86YQ2 179 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 FAM213BQ8TBF2 198 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 LINC00052Q96N35 136 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 MS4A6AQ9H2W1 248 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 CMYA5Q8N3K9 4069 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 OR10J4P0C629 311 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 ZNF688P0C7X2 276 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 PYYP10082 97 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 UBE2L3P68036 154 aaKnown RBP3.2□□□□□ -1.9
CDK13-203ENST00000465643 LYPD6BQ8NI32 183 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 STOML3Q8TAV4 291 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 BLNKQ8WV28 456 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 SLC25A2Q9BXI2 301 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 RPS10P5Q9NQ39 176 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 RPRMQ9NS64 109 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 SMAD5-AS1Q9Y6J3 95 aa3.2□□□□□ -1.9
CDK13-203ENST00000465643 A0A1B0GV50 99 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 UMAD1C9J7I0 102 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
CDK13-203ENST00000465643 CMC4P56277 68 aaPredicted RBP3.19□□□□□ -1.9
CDK13-203ENST00000465643 PSMG4Q5JS54 123 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 LCN15Q6UWW0 184 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 TRRAPQ9Y4A5 3859 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 TRAV2A0A0B4J234 112 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 CTXND1A0A1B0GTU2 59 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 MAP1LC3B2A6NCE7 125 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 OR11H12B2RN74 326 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 PHOX2AO14813 284 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 CD7P09564 240 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 ARL14EPLP0DKL9 152 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 HIST1H1EP10412 219 aaKnown RBP3.19□□□□□ -1.9
CDK13-203ENST00000465643 DEFB131AP59861 70 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 SNRPD3P62318 126 aaKnown RBP3.19□□□□□ -1.9
CDK13-203ENST00000465643 DEFB121Q5J5C9 76 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 FAM74A1Q5RGS3 127 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 SAMD13Q5VXD3 122 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 ALKAL2Q6UX46 152 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 RPP25LQ8N5L8 163 aaKnown RBP3.19□□□□□ -1.9
CDK13-203ENST00000465643 FAM24BQ8N5W8 94 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 ZNF738Q8NE65 137 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 FAM167A-AS1Q96KT0 104 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 MAP1LC3BQ9GZQ8 125 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 TUBA4BQ9H853 241 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 TMEM14CQ9P0S9 112 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 VWFP04275 2813 aa3.19□□□□□ -1.9
CDK13-203ENST00000465643 H3BQ15 152 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 MRPS12O15235 138 aaKnown RBP3.18□□□□□ -1.9
CDK13-203ENST00000465643 CXorf1O96002 111 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 STAG3L2P0CL84 134 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 IGLC2P0DOY2 106 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 GCHFRP30047 84 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 RAB5CP51148 216 aa3.18□□□□□ -1.9
CDK13-203ENST00000465643 ZNF726P1Q15940 193 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms