RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 TM2D3Q9BRN9 247 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 TRAV2A0A0B4J234 112 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 PRAC2D3DTV9 90 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 SH2D1AO60880 128 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 CBLN1P23435 193 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 SNRPD3P62318 126 aaKnown RBP10.31□□□□□ -0.76
HDAC6-215ENST00000465457 PAFAH1B2P68402 229 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
HDAC6-215ENST00000465457 TMEM136Q6ZRR5 245 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 OR1N2Q8NGR9 330 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 Q8TAT8 98 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 C8orf49Q96NF6 230 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
HDAC6-215ENST00000465457 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
HDAC6-215ENST00000465457 RIGQ13278 110 aa10.3□□□□□ -0.76
HDAC6-215ENST00000465457 FHL3Q13643 280 aa10.3□□□□□ -0.76
HDAC6-215ENST00000465457 KMT2AQ03164 3969 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 APCSP02743 223 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 CRIP1P50238 77 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 RAB4BP61018 213 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 ERCC8Q13216 396 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
HDAC6-215ENST00000465457 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 SPINK4O60575 86 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 S100A2P29034 98 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 AKR1D1P51857 326 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 OR11H1Q8NG94 326 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 OR8A1Q8NGG7 326 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 OR9G4Q8NGQ1 327 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 PGLYRP4Q96LB8 373 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 C20orf173Q96LM9 149 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
HDAC6-215ENST00000465457 HECTD4Q9Y4D8 3996 aa10.27□□□□□ -0.77
HDAC6-215ENST00000465457 CRISP2P16562 243 aa10.27□□□□□ -0.77
HDAC6-215ENST00000465457 K7EQG2 157 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 CTRLP40313 264 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 SLURP1P55000 103 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 Q0VG73 95 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 HIST3H2BBQ8N257 126 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 GATD1Q8NB37 220 aa10.26□□□□□ -0.77
HDAC6-215ENST00000465457 F2Z2F3 143 aa10.25□□□□□ -0.77
HDAC6-215ENST00000465457 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
HDAC6-215ENST00000465457 ORM1P02763 201 aa10.25□□□□□ -0.77
HDAC6-215ENST00000465457 SMIM6P0DI80 62 aa10.25□□□□□ -0.77
HDAC6-215ENST00000465457 ZNF80P51504 273 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-215ENST00000465457 APRG1Q8IVJ8 170 aa10.25□□□□□ -0.77
HDAC6-215ENST00000465457 FAM19A4Q96LR4 140 aa10.25□□□□□ -0.77
HDAC6-215ENST00000465457 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 TRAV25A0A0B4J276 109 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 CAMPP49913 170 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 DYNLRB2Q8TF09 96 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 RETNQ9HD89 108 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 SIGLEC8Q9NYZ4 499 aa10.24□□□□□ -0.77
HDAC6-215ENST00000465457 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 GZMBP10144 247 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 ESDP10768 282 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 LEPP41159 167 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 TMEM18Q96B42 140 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
HDAC6-215ENST00000465457 SAP30O75446 220 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 GPX1P07203 203 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 CSN3P07498 182 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 EDN2P20800 178 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 TSPOP30536 169 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 SLAQ13239 276 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 PSMG4Q5JS54 123 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 ZNF493Q6ZR52 646 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
HDAC6-215ENST00000465457 DLX4Q92988 240 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-215ENST00000465457 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-215ENST00000465457 A0A0J9YX75 114 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 OR4C46A6NHA9 309 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 ARMS2P0C7Q2 107 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 ZNF688P0C7X2 276 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 SRIP30626 198 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 INSL3P51460 131 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 GDF5OSQ5U4N7 250 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 BAGE3Q86Y29 109 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 Q8N1Y9 231 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 LINC00476Q8WZB0 136 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 SPAG8Q99932 426 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-215ENST00000465457 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms