RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	SS18L1	O75177	396 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	MPDU1	O75352	247 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	PITX3	O75364	302 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	DUSP14	O95147	198 aa	Known RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	NDUFC2	O95298	119 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	IGHG2	P01859	326 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	HBE1	P02100	147 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	FABP2	P12104	132 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	IGFBP3	P17936	291 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ELK1	P19419	428 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	NTF3	P20783	257 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	RPS27	P42677	84 aa	Known RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	GNG5	P63218	68 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	MEF2C	Q06413	473 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	PPP1R1A	Q13522	171 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	INSL4	Q14641	139 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	C4orf26	Q17RF5	130 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278		Q499Y3	187 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	TTC32	Q5I0X7	151 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	DEFB121	Q5J5C9	76 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	MEIG1	Q5JSS6	88 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	KLF17	Q5JT82	389 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	FAM231D	Q6ZW35	169 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	SSX8	Q7RTT4	187 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	SAXO1	Q8IYX7	474 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ZNF101	Q8IZC7	436 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	OR51G1	Q8NGK1	321 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	OR4A5	Q8NH83	315 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	PLPPR1	Q8TBJ4	325 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	PIFO	Q8TCI5	191 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	RAB37	Q96AX2	223 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ADAT3	Q96EY9	351 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ZNF488	Q96MN9	340 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	PDCD1LG2	Q9BQ51	273 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	NMES1	Q9C002	83 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	HEATR1	Q9H583	2144 aa	Known RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	CYTL1	Q9NRR1	136 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	RCL1	Q9Y2P8	373 aa	Known RBP	3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	POLR1D	Q9Y2S0	133 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278		R4GMQ9	66 aa		3.6	□□□□□ -1.83
CACNA1C-223	ENST00000465278	IGHV3-15	A0A0B4J1V0	119 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278		A0A1W2PPM0	123 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ZNF850	A8MQ14	1090 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ARL6IP5	O75915	188 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ATP5L	O75964	103 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	CA2	P00918	260 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	LGALS1	P09382	135 aa	Known RBP	3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ZNF823	P16415	610 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	COX5A	P20674	150 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	LPAR6	P43657	344 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	RASL11A	Q6T310	242 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	DPPA3	Q6W0C5	159 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	SLC25A48	Q6ZT89	311 aa	Known RBP	3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	NUP35	Q8NFH5	326 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	OR10AG1	Q8NH19	301 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	FNDC9	Q8TBE3	224 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	C18orf32	Q8TCD1	76 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	SCGB1C1	Q8TD33	95 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	C10orf105	Q8TEF2	133 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	AQP3	Q92482	292 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	S100A16	Q96FQ6	103 aa	Known RBP	3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ATP5S	Q99766	215 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	TM2D1	Q9BX74	207 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	MTFP1	Q9UDX5	166 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	ZNF257	Q9Y2Q1	563 aa		3.59	□□□□□ -1.83
CACNA1C-223	ENST00000465278	IGHV3-35	A0A0C4DH35	117 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278		A0A0U1RQV1	116 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	FAM231B	A6NCW3	169 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	LRRC30	A6NM36	301 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278		H3BMG7	143 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	OVOL1	O14753	267 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	DPM2	O94777	84 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	NAPSA	O96009	420 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278		P0DMU3	169 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	FAM231A	P0DMU4	169 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	FAM231C	P0DMU5	169 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	SLC25A6	P12236	298 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	OPRM1	P35372	400 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	DLX1	P56177	255 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	TMEM258	P61165	79 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	PLGLB1	Q02325	96 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	MSMO1	Q15800	293 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	CEACAM16	Q2WEN9	425 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	C1orf100	Q5SVJ3	147 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	FAM27D1	Q5T7N8	215 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	ZNF880	Q6PDB4	577 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	AAED1	Q7RTV5	226 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	SLC22A24	Q8N4F4	322 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278		Q8N976	141 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	OR10AC1	Q8NH08	325 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	OR51H1	Q8NH63	302 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	OR9G1	Q8NH87	305 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	VSIG2	Q96IQ7	327 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	C18orf15	Q96N68	181 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	LINC01587	Q99440	93 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	IMUP	Q9GZP8	106 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	COMMD5	Q9GZQ3	224 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	EIF5A2	Q9GZV4	153 aa	Known RBP	3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	VSIR	Q9H7M9	311 aa		3.58	□□□□□ -1.84
CACNA1C-223	ENST00000465278	TNFRSF19	Q9NS68	423 aa		3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms