RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 APODP05090 189 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 FGF7P21781 194 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 S100PP25815 95 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 SCIMPQ6UWF3 145 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 FOXI2Q6ZQN5 318 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 ATOH7Q8N100 152 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 TSTD1Q8NFU3 115 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 OR10AG1Q8NH19 301 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 Q8TAT8 98 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 RAB37Q96AX2 223 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 SNRNP25Q9BV90 132 aaKnown RBP0.94□□□□□ -2.26
CLK1-208ENST00000464454 BANF2Q9H503 90 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 CCDC167Q9P0B6 97 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 COMMD3Q9UBI1 195 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 LSM2Q9Y333 95 aaKnown RBP0.94□□□□□ -2.26
CLK1-208ENST00000464454 UNC13CQ8NB66 2214 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 MYO18AQ92614 2054 aaKnown RBP0.93□□□□□ -2.26
CLK1-208ENST00000464454 CECR2Q9BXF3 1484 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 SYNJ1O43426 1573 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 IGLV3-32A0A0A0MS00 114 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 TRAV2A0A0B4J234 112 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 A0A0J9YY99 117 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 LOC100130705A0A1B0GUX0 176 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 IFITM5A6NNB3 132 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 H3BRM9 83 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 K7ERU9 68 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 GNG7O60262 68 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 FREM3P0C091 2139 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 SNRPD3P62318 126 aaKnown RBP0.93□□□□□ -2.26
CLK1-208ENST00000464454 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 WHAMMP3Q1A5X7 153 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 LINC01545Q5VT33 79 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 GKN2Q86XP6 184 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 OTOSQ8NHW6 89 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 CST11Q9H112 138 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 FKBP11Q9NYL4 201 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 SIP14410 1827 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 FAM135AQ9P2D6 1515 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 ROCK2O75116 1388 aaKnown RBP0.93□□□□□ -2.26
CLK1-208ENST00000464454 CNTRLQ7Z7A1 2325 aa0.93□□□□□ -2.26
CLK1-208ENST00000464454 N4BP2Q86UW6 1770 aaPredicted RBP0.93□□□□□ -2.26
CLK1-208ENST00000464454 CHD3Q12873 2000 aaKnown RBP0.93□□□□□ -2.26
CLK1-208ENST00000464454 MBD5Q9P267 1494 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 MYOM3Q5VTT5 1437 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 TRAV12-2A0A075B6T6 113 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 CORTO00230 105 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 PYYP10082 97 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 COX7CP15954 63 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 ETV6P41212 452 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 GUCA1AP43080 201 aaPredicted RBP0.92□□□□□ -2.26
CLK1-208ENST00000464454 CIRBPQ14011 172 aaKnown RBP0.92□□□□□ -2.26
CLK1-208ENST00000464454 OCIAD2Q56VL3 154 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 OR5AK2Q8NH90 309 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 ATP6V0E2Q8NHE4 81 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 AP1S3Q96PC3 154 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 FANCMQ8IYD8 2048 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 IBTKQ9P2D0 1353 aaPredicted RBP0.92□□□□□ -2.26
CLK1-208ENST00000464454 COL24A1Q17RW2 1714 aa0.92□□□□□ -2.26
CLK1-208ENST00000464454 C5orf67F2Z3F1 127 aa0.91□□□□□ -2.26
CLK1-208ENST00000464454 KLF7O75840 302 aaPredicted RBP0.91□□□□□ -2.26
CLK1-208ENST00000464454 IGHV3-30P01768 117 aa0.91□□□□□ -2.26
CLK1-208ENST00000464454 IGHV3-30-5P0DP03 117 aa0.91□□□□□ -2.26
CLK1-208ENST00000464454 ZCCHC23Q6ZST2 131 aa0.91□□□□□ -2.26
CLK1-208ENST00000464454 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.91□□□□□ -2.26
CLK1-208ENST00000464454 PP6455Q8WZ26 134 aa0.91□□□□□ -2.26
CLK1-208ENST00000464454 CIB3Q96Q77 187 aaPredicted RBP0.91□□□□□ -2.26
CLK1-208ENST00000464454 ASCC3Q8N3C0 2202 aaKnown RBP0.91□□□□□ -2.26
CLK1-208ENST00000464454 MGAMO43451 1857 aa0.9□□□□□ -2.26
CLK1-208ENST00000464454 FGD6Q6ZV73 1430 aa0.9□□□□□ -2.26
CLK1-208ENST00000464454 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 PTPRFP10586 1907 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 A0A0G2JMM0 328 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 CXorf51AA0A1B0GTR3 108 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 A0A1W2PPB8 328 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 KIR3DP1A8MWS1 328 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 TNFP01375 233 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 CKS2P33552 79 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 IDO2Q6ZQW0 420 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 DEFB132Q7Z7B7 95 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 C14orf144Q96I85 54 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 AGPAT4-IT1Q9H0P7 198 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 SCN3BQ9NY72 215 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 COA4Q9NYJ1 87 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 IER3IP1Q9Y5U9 82 aa0.9□□□□□ -2.27
CLK1-208ENST00000464454 NALCNQ8IZF0 1738 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 CDK5RAP2Q96SN8 1893 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 USP54Q70EL1 1684 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 A2ML1A8K2U0 1454 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 MRC2Q9UBG0 1479 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 IGHV1-24A0A0C4DH33 117 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 FAM25AB3EWG3 89 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 FAM25CB3EWG5 89 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 FAM25GB3EWG6 89 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 RBP4P02753 201 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 EFNA4P52798 201 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 PCBD1P61457 104 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 CLLU1Q5K131 121 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 Q6ZUT4 128 aa0.89□□□□□ -2.27
CLK1-208ENST00000464454 SLC25A26Q70HW3 274 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms