RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 PHRF1Q9P1Y6 1649 aaKnown RBP1.34□□□□□ -2.19
GPNMB-205ENST00000463011 SIP14410 1827 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 NUPR2A6NF83 97 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 IGF2P01344 180 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 ANGP03950 147 aaKnown RBP1.34□□□□□ -2.19
GPNMB-205ENST00000463011 PDE6GP18545 87 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 RHOHQ15669 191 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 MIC13Q5XKP0 118 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 UNQ5815/PRO19632Q6UWF5 114 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 LYPD5Q6UWN5 251 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 ATP11AUNQ6ZP68 121 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 SBSPONQ8IVN8 264 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 E9PCH4 1651 aa1.34□□□□□ -2.19
GPNMB-205ENST00000463011 MCM3APO60318 1980 aa1.34□□□□□ -2.2
GPNMB-205ENST00000463011 KIAA1549Q9HCM3 1950 aa1.34□□□□□ -2.2
GPNMB-205ENST00000463011 IBTKQ9P2D0 1353 aaPredicted RBP1.34□□□□□ -2.2
GPNMB-205ENST00000463011 KIAA1549LQ6ZVL6 1849 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 LRP5O75197 1615 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 FREM3P0C091 2139 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 ALPK3Q96L96 1907 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 UHRF1BP1LA0JNW5 1464 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 ARFGEF3Q5TH69 2177 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 A0A0G2JMM0 328 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 NCR3O14931 201 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 TPST1O60507 370 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 RPL13AP3Q6NVV1 102 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 Q6ZUT4 128 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 ATOH7Q8N100 152 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 DYNLRB2Q8TF09 96 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 LINC00470Q9BZP3 86 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 SAR1AQ9NR31 198 aa1.33□□□□□ -2.2
GPNMB-205ENST00000463011 MRPL36Q9P0J6 103 aaKnown RBP1.33□□□□□ -2.2
GPNMB-205ENST00000463011 MYOM3Q5VTT5 1437 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 SDK1Q7Z5N4 2213 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 VIRMAQ69YN4 1812 aaKnown RBP1.32□□□□□ -2.2
GPNMB-205ENST00000463011 FAM25AB3EWG3 89 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 FAM25CB3EWG5 89 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 FAM25GB3EWG6 89 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 IGHV3-30P01768 117 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 TFF1P04155 84 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 GYPBP06028 91 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 IGHV3-30-5P0DP03 117 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 RRAS2P62070 204 aaPredicted RBP1.32□□□□□ -2.2
GPNMB-205ENST00000463011 SELENOWP63302 87 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 AMELYQ99218 206 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 PSMG3Q9BT73 122 aaPredicted RBP1.32□□□□□ -2.2
GPNMB-205ENST00000463011 TMEM191AQ9H0A3 160 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 SORL1Q92673 2214 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 ZFC3H1O60293 1989 aaKnown RBP1.32□□□□□ -2.2
GPNMB-205ENST00000463011 TANC2Q9HCD6 1990 aa1.32□□□□□ -2.2
GPNMB-205ENST00000463011 KIDINS220Q9ULH0 1771 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
GPNMB-205ENST00000463011 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 PYYP10082 97 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 FXYD4P59646 89 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 DMAC1Q96GE9 116 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 SDF2Q99470 211 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 ATG5Q9H1Y0 275 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 HEATR1Q9H583 2144 aaKnown RBP1.31□□□□□ -2.2
GPNMB-205ENST00000463011 GRIN2AQ12879 1464 aa1.31□□□□□ -2.2
GPNMB-205ENST00000463011 PTPRFP10586 1907 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 A0A1B0GV90 55 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 PITX3O75364 302 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 GUCA1AP43080 201 aaPredicted RBP1.3□□□□□ -2.2
GPNMB-205ENST00000463011 EFNA4P52798 201 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 EMX2Q04743 252 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 VSTM2AQ8TAG5 236 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 C1orf54Q8WWF1 131 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 PPDPFLQ8WWR9 84 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 TRIOBPQ9H2D6 2365 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 MYH1P12882 1939 aa1.3□□□□□ -2.2
GPNMB-205ENST00000463011 CACNA1BQ00975 2339 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 CTTNBP2Q8WZ74 1663 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 CDK5RAP2Q96SN8 1893 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 TRAV2A0A0B4J234 112 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 SCIMPQ6UWF3 145 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 KCNRGQ8N5I3 272 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 CCDC167Q9P0B6 97 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 PEAK1Q9H792 1746 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 ANK1P16157 1881 aa1.29□□□□□ -2.2
GPNMB-205ENST00000463011 TRBV10-1A0A0K0K1A3 114 aa1.28□□□□□ -2.2
GPNMB-205ENST00000463011 SLC25A6P12236 298 aa1.28□□□□□ -2.2
GPNMB-205ENST00000463011 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
GPNMB-205ENST00000463011 MRPL35Q9NZE8 188 aaKnown RBP1.28□□□□□ -2.2
GPNMB-205ENST00000463011 ROCK2O75116 1388 aaKnown RBP1.28□□□□□ -2.2
GPNMB-205ENST00000463011 TMEM2Q9UHN6 1383 aa1.28□□□□□ -2.2
GPNMB-205ENST00000463011 CDK12Q9NYV4 1490 aaPredicted RBP1.28□□□□□ -2.2
GPNMB-205ENST00000463011 ADGRB1O14514 1584 aa1.28□□□□□ -2.2
GPNMB-205ENST00000463011 HELZP42694 1942 aaKnown RBP1.27□□□□□ -2.21
GPNMB-205ENST00000463011 CXorf51AA0A1B0GTR3 108 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 LOC101927531A0A1B0GV80 90 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 HIGD1CA8MV81 97 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 PIRTP0C851 137 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 SPCS2Q15005 226 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 Q6ZQY7 126 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 Q86TA4 180 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 PDCD10Q9BUL8 212 aa1.27□□□□□ -2.21
GPNMB-205ENST00000463011 UNC13CQ8NB66 2214 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms