RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 CCL20P78556 96 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 HIST1H1AQ02539 215 aaPredicted RBP5.68□□□□□ -1.5
GARNL3-212ENST00000463005 ZNF506Q5JVG8 444 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 GOLT1AQ6ZVE7 132 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 FAM24BQ8N5W8 94 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 SUN5Q8TC36 379 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 DCANP1Q8TF63 244 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 MRPL53Q96EL3 112 aaKnown RBP5.68□□□□□ -1.5
GARNL3-212ENST00000463005 NDFIP1Q9BT67 221 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 MED9Q9NWA0 146 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 CELA1Q9UNI1 258 aa5.68□□□□□ -1.5
GARNL3-212ENST00000463005 RAB19A4D1S5 217 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 SMIM9A6NGZ8 99 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 GGTLC3B5MD39 225 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 M0R3E3 92 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 NDUFB4O95168 129 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 GNG5P63218 68 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 NDUFA5Q16718 116 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 ZNF674Q2M3X9 581 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 CYB561D1Q8N8Q1 229 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 OR4B1Q8NGF8 309 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 LYPD6BQ8NI32 183 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 HIST1H2BAQ96A08 127 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 ATG101Q9BSB4 218 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 EPDR1Q9UM22 224 aa5.67□□□□□ -1.5
GARNL3-212ENST00000463005 IGKV2-40A0A087WW87 121 aaPredicted RBP5.66□□□□□ -1.5
GARNL3-212ENST00000463005 TRAV8-2A0A0B4J237 113 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 TEX48A0A1B0GUV7 120 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 FBLL1A6NHQ2 334 aaKnown RBP5.66□□□□□ -1.5
GARNL3-212ENST00000463005 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 ZNF705FA8MVS1 300 aaPredicted RBP5.66□□□□□ -1.5
GARNL3-212ENST00000463005 SOCS3O14543 225 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 PRYO14603 147 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 IGKV2D-40P01614 121 aaPredicted RBP5.66□□□□□ -1.5
GARNL3-212ENST00000463005 TCRAP04437 139 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 S100A9P06702 114 aaKnown RBP5.66□□□□□ -1.5
GARNL3-212ENST00000463005 ACTL10Q5JWF8 245 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 UQCC3Q6UW78 93 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 FOXI2Q6ZQN5 318 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 ARL6IP6Q8N6S5 226 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 FMC1Q96HJ9 113 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 SMDT1Q9H4I9 107 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 SCRT2Q9NQ03 307 aa5.66□□□□□ -1.5
GARNL3-212ENST00000463005 RBAKDNA6NC62 111 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 LINC00862A6NCI5 91 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 IGKV3-20P01619 116 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 CT45A10P0DMU9 189 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 PRB4P10163 310 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-212ENST00000463005 TSPOP30536 169 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 PRNTQ86SH4 94 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 TMEM75Q8N9X5 138 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 OR8A1Q8NGG7 326 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 NIPSNAP3BQ9BS92 247 aa5.65□□□□□ -1.5
GARNL3-212ENST00000463005 SAV1Q9H4B6 383 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-212ENST00000463005 A0A0J9YX75 114 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 ZNF727A8MUV8 499 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 F6UB75 175 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 ZNF705DP0CH99 300 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-212ENST00000463005 ZNF705BP0CI00 300 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-212ENST00000463005 HLA-DRB4P13762 266 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 LEPP41159 167 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 GNG4P50150 75 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 FLI1Q01543 452 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-212ENST00000463005 ZNF705AQ6ZN79 300 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-212ENST00000463005 SGK494Q96LW2 274 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 LINC00477Q96M19 166 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 SMIM7Q9BQ49 75 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 CTDSP1Q9GZU7 261 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 SLC35B3Q9H1N7 401 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 PSG8Q9UQ74 426 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 HLA-DRB4X5D2U9 266 aa5.64□□□□□ -1.51
GARNL3-212ENST00000463005 TRAV34A0A0B4J273 112 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 PRAC2D3DTV9 90 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 F8W036 122 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 NDUFS6O75380 124 aaKnown RBP5.63□□□□□ -1.51
GARNL3-212ENST00000463005 SRP19P09132 144 aaKnown RBP5.63□□□□□ -1.51
GARNL3-212ENST00000463005 SFTA3P0C7M3 94 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 MGST1P10620 155 aaKnown RBP5.63□□□□□ -1.51
GARNL3-212ENST00000463005 RPL35P42766 123 aaKnown RBP5.63□□□□□ -1.51
GARNL3-212ENST00000463005 ZNF138P52744 262 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 TAS2R60P59551 318 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 DEFB1P60022 68 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 ERCC8Q13216 396 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 FAM74A3Q4VXF1 159 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 SAPCD1Q5SSQ6 148 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 Q86TA4 180 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 C6orf223Q8N319 242 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 C15orf53Q8NAA6 179 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 C11orf52Q96A22 123 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 PARLQ9H300 379 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 BIN3Q9NQY0 253 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 HSPG2P98160 4391 aa5.63□□□□□ -1.51
GARNL3-212ENST00000463005 TRAV8-1A0A0A6YYK1 113 aa5.62□□□□□ -1.51
GARNL3-212ENST00000463005 NBDYA0A0U1RRE5 68 aa5.62□□□□□ -1.51
GARNL3-212ENST00000463005 H3BMM0 161 aa5.62□□□□□ -1.51
GARNL3-212ENST00000463005 GPX1P07203 203 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms