RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	ZNF25	P17030	456 aa	Predicted RBP	9.05	□□□□□ -0.96
RBM39-223	ENST00000463004	TMEM158	Q8WZ71	300 aa		9.05	□□□□□ -0.96
RBM39-223	ENST00000463004	C1orf159	Q96HA4	380 aa		9.05	□□□□□ -0.96
RBM39-223	ENST00000463004	ATRX	P46100	2492 aa		9.05	□□□□□ -0.96
RBM39-223	ENST00000463004	C3orf79	P0CE67	100 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	ZNF503	Q96F45	646 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	HTN3	P15516	51 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	DNAJC30	Q96LL9	226 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	SMIM2	Q9BVW6	85 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	AZU1	P20160	251 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	CFAP161	Q6P656	301 aa		9.04	□□□□□ -0.96
RBM39-223	ENST00000463004	NAV2	Q8IVL1	2488 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	RNASE1	P07998	156 aa	Known RBP	9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	SMIM13	P0DJ93	91 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	HINT1	P49773	126 aa	Predicted RBP	9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	RHOH	Q15669	191 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	HLA-DMB	P28068	263 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	CTRL	P40313	264 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	GFI1B	Q5VTD9	330 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004	ARFGEF3	Q5TH69	2177 aa		9.03	□□□□□ -0.96
RBM39-223	ENST00000463004		A0A087WX48	190 aa		9.02	□□□□□ -0.96
RBM39-223	ENST00000463004	C19orf71	A6NCJ1	209 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	RASL10A	Q92737	203 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	ZFAND3	Q9H8U3	227 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004		A0A087WWL8	130 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	CRP	P02741	224 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	ASPHD1	Q5U4P2	390 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	C16orf74	Q96GX8	76 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	KLK9	Q9UKQ9	250 aa		9.02	□□□□□ -0.97
RBM39-223	ENST00000463004	DAD1	P61803	113 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	TNC	P24821	2201 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	IGLV1-40	P01703	118 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	HSD52	Q0P140	79 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	NAV3	Q8IVL0	2385 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004		A0A0J9YX75	114 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	SDHAF1	A6NFY7	115 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	PSMB8	P28062	276 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	CTAG1A	P78358	180 aa		9.01	□□□□□ -0.97
RBM39-223	ENST00000463004	ANKRD11	Q6UB99	2663 aa	Predicted RBP	9	□□□□□ -0.97
RBM39-223	ENST00000463004	DEFB136	Q30KP8	78 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	LGALS9B	Q3B8N2	356 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	LGALS9C	Q6DKI2	356 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	C14orf144	Q96I85	54 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	SELENOK	Q9Y6D0	94 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	C2orf66	Q6UXQ4	117 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	PIEZO2	Q9H5I5	2752 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	CEP295	Q9C0D2	2601 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	SH2D6	Q7Z4S9	175 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004		A0A1W2PPR1	153 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	UNQ9165/PRO28630	Q6UXU0	137 aa		9	□□□□□ -0.97
RBM39-223	ENST00000463004	TRBV25-1	A0A075B6N4	114 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	TRAV12-2	A0A075B6T6	113 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	GAGE10	A6NGK3	116 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	TMEM238	C9JI98	176 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	GHRH	P01286	108 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	LINC01548	A6NM66	108 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	SMKR1	H3BMG3	65 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004		K7EQG2	157 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	MLST8	Q9BVC4	326 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	SIGLEC8	Q9NYZ4	499 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	IGKV3OR2-268	A0A0C4DH90	116 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	HLA-DRB4	P13762	266 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004		Q6ZSV7	163 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004		Q71RC1	249 aa	Predicted RBP	8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	LINC00469	Q8N7U9	141 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004	HLA-DRB4	X5D2U9	266 aa		8.99	□□□□□ -0.97
RBM39-223	ENST00000463004		F6UB75	175 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	NDUFA7	O95182	113 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	MAL	P21145	153 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	HILS1	P60008	231 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	PMVK	Q15126	192 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	PYY3	Q5JQD4	70 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	CITED2	Q99967	270 aa	Predicted RBP	8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	ZNF702P	Q9H963	129 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	RPL24	P83731	157 aa	Known RBP	8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	PCSK5	Q92824	1860 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	TCTA	P57738	103 aa		8.98	□□□□□ -0.97
RBM39-223	ENST00000463004	CD300E	Q496F6	205 aa	Predicted RBP	8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	ZNF815P	A8K554	130 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	NPY	P01303	97 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	TMEM243	Q9BU79	118 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	CBY1	Q9Y3M2	126 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	IGHV3-73	A0A0B4J1V6	119 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	SS18	Q15532	418 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	APOM	O95445	188 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	TRBV12-3	P01733	135 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	DEFB130B	P0DP73	79 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	DEFB130A	P0DP74	79 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	TMEM61	Q8N0U2	210 aa		8.97	□□□□□ -0.97
RBM39-223	ENST00000463004	PRB4	P10163	310 aa	Predicted RBP	8.96	□□□□□ -0.97
RBM39-223	ENST00000463004	BOD1L2	Q8IYS8	172 aa		8.96	□□□□□ -0.97
RBM39-223	ENST00000463004	PRAC2	D3DTV9	90 aa		8.96	□□□□□ -0.98
RBM39-223	ENST00000463004	IGHV3-53	P01767	116 aa		8.96	□□□□□ -0.98
RBM39-223	ENST00000463004	TP53TG1	Q9Y2A0	90 aa		8.96	□□□□□ -0.98
RBM39-223	ENST00000463004	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	8.96	□□□□□ -0.98
RBM39-223	ENST00000463004	DLX4	Q92988	240 aa	Predicted RBP	8.96	□□□□□ -0.98
RBM39-223	ENST00000463004	NOTCH2	Q04721	2471 aa		8.95	□□□□□ -0.98
RBM39-223	ENST00000463004	ORAOV1	Q8WV07	137 aa		8.95	□□□□□ -0.98
RBM39-223	ENST00000463004	HCFC1	P51610	2035 aa		8.95	□□□□□ -0.98
RBM39-223	ENST00000463004	IGHV1-24	A0A0C4DH33	117 aa		8.95	□□□□□ -0.98

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