RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 NHP2Q9NX24 153 aaKnown RBP1.47□□□□□ -2.17
SMC4-203ENST00000462668 CKLFQ9UBR5 152 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 ERG28Q9UKR5 140 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 A0A0D9SG52 128 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 ZNF705FA8MVS1 300 aaPredicted RBP1.47□□□□□ -2.17
SMC4-203ENST00000462668 LOC730098B7Z3J9 87 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 SLC22A1O15245 554 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 ZNF345Q14585 488 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 OSTCQ9NRP0 149 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 FLNCQ14315 2725 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 MAP1BP46821 2468 aaKnown RBP1.47□□□□□ -2.17
SMC4-203ENST00000462668 DYNLT1P63172 113 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 ASB16-AS1Q495Z4 193 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 IGFL3Q6UXB1 125 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 MORN4Q8NDC4 146 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 C1orf54Q8WWF1 131 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 TVP23CQ96ET8 276 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 TMEM138Q9NPI0 162 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 HS3ST2Q9Y278 367 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 CST7O76096 145 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 OR2H2O95918 312 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 RPL35P42766 123 aaKnown RBP1.46□□□□□ -2.18
SMC4-203ENST00000462668 MSMO1Q15800 293 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 C7orf65Q6ZTY9 151 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 BAIAP2Q9UQB8 552 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 ARID1AO14497 2285 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 TRBV27A0A0K0K1C4 114 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 HBBP68871 147 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 RHOGP84095 191 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 DEFB134Q4QY38 66 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 OR5A2Q8NGI9 324 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 AQP3Q92482 292 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 C2orf88Q9BSF0 95 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 MED11Q9P086 117 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 A0A1B0GVG6 124 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 KRTAP10-1P60331 282 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 EIF5AP63241 154 aaKnown RBP1.46□□□□□ -2.18
SMC4-203ENST00000462668 KRTAP6-3Q3LI67 103 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 OR2T10Q8NGZ9 312 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 MBD3L1Q8WWY6 194 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
SMC4-203ENST00000462668 VMA21Q3ZAQ7 101 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 CMTM2Q8TAZ6 248 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 LXNQ9BS40 222 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 COL7A1Q02388 2944 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 SDCBPO00560 298 aaPredicted RBP1.45□□□□□ -2.18
SMC4-203ENST00000462668 OR1I1O60431 355 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 CXCL1P09341 107 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 CRYGAP11844 174 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 SRP14P37108 136 aaKnown RBP1.45□□□□□ -2.18
SMC4-203ENST00000462668 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 Q8N2B8 174 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 NCOR1O75376 2440 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 DNAH10Q8IVF4 4471 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 SHROOM3Q8TF72 1996 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 DPM2O94777 84 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 RNASE2P10153 161 aaKnown RBP1.45□□□□□ -2.18
SMC4-203ENST00000462668 CRYGSP22914 178 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 PDE6HQ13956 83 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 SLC35E3Q7Z769 313 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 MYH1P12882 1939 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 STARD9Q9P2P6 4700 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 HSPG2P98160 4391 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 A6NN06 94 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 HIST1H2BKO60814 126 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 HIST1H2BJP06899 126 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 BCL2L15Q5TBC7 163 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 HCP5Q6MZN7 132 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 Q6ZTI0 123 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 PRR14LQ5THK1 2151 aa1.45□□□□□ -2.18
SMC4-203ENST00000462668 TTC28Q96AY4 2481 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 LCN15Q6UWW0 184 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 Q8N814 137 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 MCEEQ96PE7 176 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 CYTL1Q9NRR1 136 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 TRAPPC2LQ9UL33 140 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 TMSB15BA0A087X1C1 80 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 C1orf196B1AJZ1 125 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 NDUFB3O43676 98 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 DEFA4P12838 97 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 HAGHLQ6PII5 290 aaPredicted RBP1.44□□□□□ -2.18
SMC4-203ENST00000462668 ITPR2Q14571 2701 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 ADAT1Q9BUB4 502 aaKnown RBP1.44□□□□□ -2.18
SMC4-203ENST00000462668 OR5AC2Q9NZP5 309 aa1.44□□□□□ -2.18
SMC4-203ENST00000462668 MCM3APO60318 1980 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 TNRC6AQ8NDV7 1962 aaKnown RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 A8MWV9 139 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 LINC00587B1AMM8 73 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 HIST1H1AQ02539 215 aaPredicted RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 DIAPH2-AS1Q14236 149 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 SOSTDC1Q6X4U4 206 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 OR8I2Q8N0Y5 310 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 NDUFB11Q9NX14 153 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 NOTCH2Q04721 2471 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 DYNC1H1Q14204 4646 aaKnown RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 MEIKINA0A087WXM9 373 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 SULT1C4O75897 302 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 LYZL6O75951 148 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 METTL15P1P0C7V9 234 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms