RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SRP19P09132 144 aaKnown RBP8.42□□□□□ -1.06
CPNE1-221ENST00000462352 GNG4P50150 75 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
CPNE1-221ENST00000462352 FAM162BQ5T6X4 162 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 KCNS1Q96KK3 526 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 PARLQ9H300 379 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 NOP10Q9NPE3 64 aaKnown RBP8.42□□□□□ -1.06
CPNE1-221ENST00000462352 GSN-AS1Q9NRJ2 163 aa8.42□□□□□ -1.06
CPNE1-221ENST00000462352 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 GNRH2O43555 120 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 TYMSP04818 313 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 CEBPGP53567 150 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 TCL1AP56279 114 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 SRSF3P84103 164 aaKnown RBP8.41□□□□□ -1.06
CPNE1-221ENST00000462352 C12orf74Q32Q52 190 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 MDFICQ9P1T7 246 aa8.41□□□□□ -1.06
CPNE1-221ENST00000462352 IGKV3D-20A0A0C4DH25 116 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 PGPEP1LA6NFU8 196 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 C9JCJ5 164 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 ORM1P02763 201 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
CPNE1-221ENST00000462352 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 Q6ZTC4 211 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
CPNE1-221ENST00000462352 CSMD3Q7Z407 3707 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 C9JQL5 133 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 MGST1P10620 155 aaKnown RBP8.39□□□□□ -1.07
CPNE1-221ENST00000462352 DAD1P61803 113 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 PEA15Q15121 130 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 SMDT1Q9H4I9 107 aa8.39□□□□□ -1.07
CPNE1-221ENST00000462352 B4DEV8 164 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 KRBOX1C9JBD0 128 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 C3orf84H3BNL1 204 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 M0R036 132 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 Q6ZTI0 123 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 LINC00612Q8N6U2 182 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
CPNE1-221ENST00000462352 SMIM7Q9BQ49 75 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 SPXQ9BT56 116 aa8.38□□□□□ -1.07
CPNE1-221ENST00000462352 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 GAGE12BA1L429 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 SPINK4O60575 86 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 GAGE7O76087 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 GAGE12FP0CL80 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 GAGE12GP0CL81 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 GAGE12IP0CL82 117 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 OCC1Q8TAD7 63 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
CPNE1-221ENST00000462352 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
CPNE1-221ENST00000462352 TMSB15BA0A087X1C1 80 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 TRAV10A0A0B4J240 114 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 GRIFINA4D1Z8 144 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 K7EN84 100 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
CPNE1-221ENST00000462352 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
CPNE1-221ENST00000462352 ASIPP42127 132 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
CPNE1-221ENST00000462352 OR5I1Q13606 314 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 CASC10Q5T4H9 136 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-221ENST00000462352 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
CPNE1-221ENST00000462352 C9orf85Q96MD7 179 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 BIN3Q9NQY0 253 aa8.36□□□□□ -1.07
CPNE1-221ENST00000462352 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
CPNE1-221ENST00000462352 NUPR2A6NF83 97 aa8.35□□□□□ -1.07
CPNE1-221ENST00000462352 M0R2P5 195 aa8.35□□□□□ -1.07
CPNE1-221ENST00000462352 DNLZQ5SXM8 178 aa8.35□□□□□ -1.07
CPNE1-221ENST00000462352 LY96Q9Y6Y9 160 aa8.35□□□□□ -1.07
CPNE1-221ENST00000462352 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
CPNE1-221ENST00000462352 TRGV2A0A075B6R0 118 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 H3BVH4 76 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 P01737 135 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 ATP5G1P05496 136 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 HTN3P15516 51 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 NUDT10Q8NFP7 164 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 RASL10AQ92737 203 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 IL36BQ9NZH7 164 aa8.34□□□□□ -1.07
CPNE1-221ENST00000462352 CXCL1P09341 107 aa8.33□□□□□ -1.08
CPNE1-221ENST00000462352 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
CPNE1-221ENST00000462352 TMEM241Q24JQ0 296 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms