RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 M0R2P5 195 aa12.97□□□□□ -0.33
VARS-220ENST00000461874 NEGR1Q7Z3B1 354 aa12.97□□□□□ -0.33
VARS-220ENST00000461874 C5orf17Q8NAS9 161 aa12.97□□□□□ -0.33
VARS-220ENST00000461874 SGK494Q96LW2 274 aa12.97□□□□□ -0.33
VARS-220ENST00000461874 TNFSF18Q9UNG2 199 aa12.97□□□□□ -0.33
VARS-220ENST00000461874 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 TCRAP04437 139 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 TYMSP04818 313 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 LINC00315P59091 139 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
VARS-220ENST00000461874 KCNS1Q96KK3 526 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 HSPG2P98160 4391 aa12.96□□□□□ -0.33
VARS-220ENST00000461874 RNF222A6NCQ9 220 aa12.95□□□□□ -0.34
VARS-220ENST00000461874 K7EQD1 137 aa12.95□□□□□ -0.34
VARS-220ENST00000461874 CXorf1O96002 111 aa12.95□□□□□ -0.34
VARS-220ENST00000461874 SPATA12Q7Z6I5 190 aa12.95□□□□□ -0.34
VARS-220ENST00000461874 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
VARS-220ENST00000461874 TMEM167BQ9NRX6 74 aa12.95□□□□□ -0.34
VARS-220ENST00000461874 K7EQM0 130 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 ORM1P02763 201 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 GYPEP15421 78 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 SRIP30626 198 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 SUMO1P63165 101 aaKnown RBP12.94□□□□□ -0.34
VARS-220ENST00000461874 RPL7L1Q6DKI1 246 aaKnown RBP12.94□□□□□ -0.34
VARS-220ENST00000461874 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 PCNPQ8WW12 178 aaKnown RBP12.94□□□□□ -0.34
VARS-220ENST00000461874 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
VARS-220ENST00000461874 FXYD6-FXYD2A0A087WZ82 144 aa12.93□□□□□ -0.34
VARS-220ENST00000461874 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
VARS-220ENST00000461874 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
VARS-220ENST00000461874 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
VARS-220ENST00000461874 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
VARS-220ENST00000461874 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
VARS-220ENST00000461874 CDK2AP2O75956 126 aa12.92□□□□□ -0.34
VARS-220ENST00000461874 OR2T35Q8NGX2 323 aa12.92□□□□□ -0.34
VARS-220ENST00000461874 C11orf21Q9P2W6 132 aa12.92□□□□□ -0.34
VARS-220ENST00000461874 C9JCJ5 164 aa12.91□□□□□ -0.34
VARS-220ENST00000461874 TAAR5O14804 337 aa12.91□□□□□ -0.34
VARS-220ENST00000461874 KRTAP10-2P60368 255 aa12.91□□□□□ -0.34
VARS-220ENST00000461874 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
VARS-220ENST00000461874 CYB561D1Q8N8Q1 229 aa12.91□□□□□ -0.34
VARS-220ENST00000461874 A0A1W2PRE2 83 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 GCGP01275 180 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 PFN1P07737 140 aaKnown RBP12.9□□□□□ -0.34
VARS-220ENST00000461874 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 SMUG1Q53HV7 270 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 TXNDC17Q9BRA2 123 aa12.9□□□□□ -0.34
VARS-220ENST00000461874 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
VARS-220ENST00000461874 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
VARS-220ENST00000461874 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
VARS-220ENST00000461874 LY96Q9Y6Y9 160 aa12.89□□□□□ -0.35
VARS-220ENST00000461874 DNAH5Q8TE73 4624 aa12.89□□□□□ -0.35
VARS-220ENST00000461874 ABCA13Q86UQ4 5058 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 TRAV9-2A0A087WT02 112 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 LOC100131303A0A0U1RQF7 123 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 G3V3Q6 166 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 ZFP69Q49AA0 526 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 WFDC10BQ8IUB3 73 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 KRTAP4-5Q9BYR2 181 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
VARS-220ENST00000461874 RS1O15537 224 aa12.87□□□□□ -0.35
VARS-220ENST00000461874 RGS21Q2M5E4 152 aa12.87□□□□□ -0.35
VARS-220ENST00000461874 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
VARS-220ENST00000461874 LINC00479Q96M42 142 aa12.87□□□□□ -0.35
VARS-220ENST00000461874 APOBP04114 4563 aaKnown RBP12.86□□□□□ -0.35
VARS-220ENST00000461874 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 K7EP13 123 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 DNAH10OSP0CZ25 163 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 PTH2Q96A98 100 aa12.86□□□□□ -0.35
VARS-220ENST00000461874 CIDEAO60543 219 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 IFNA7P01567 189 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 EVI2AP22794 236 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 TIRAPP58753 221 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 UBE2G2P60604 165 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
VARS-220ENST00000461874 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
VARS-220ENST00000461874 FGF8P55075 233 aaPredicted RBP12.84□□□□□ -0.35
VARS-220ENST00000461874 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
VARS-220ENST00000461874 NKX6-2Q9C056 277 aaPredicted RBP12.84□□□□□ -0.35
VARS-220ENST00000461874 CYTL1Q9NRR1 136 aa12.84□□□□□ -0.35
VARS-220ENST00000461874 MSRB1Q9NZV6 116 aa12.84□□□□□ -0.35
VARS-220ENST00000461874 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
VARS-220ENST00000461874 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
VARS-220ENST00000461874 FAM74A7A6NL05 159 aa12.83□□□□□ -0.36
VARS-220ENST00000461874 PEX7O00628 323 aa12.83□□□□□ -0.36
VARS-220ENST00000461874 ARPC5O15511 151 aa12.83□□□□□ -0.36
VARS-220ENST00000461874 PPT1P50897 306 aa12.83□□□□□ -0.36
VARS-220ENST00000461874 ERVFC1-1P60608 527 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms