RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 CCL20P78556 96 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 PRR9Q5T870 116 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 Q6ZQT7 251 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 Q8TAT8 98 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 PYGO2Q9BRQ0 406 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 C1orf196B1AJZ1 125 aa12.23□□□□□ -0.45
MRPL28-207ENST00000461550 SNURFLB1AK76 121 aa12.23□□□□□ -0.45
MRPL28-207ENST00000461550 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
MRPL28-207ENST00000461550 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
MRPL28-207ENST00000461550 HECTD4Q9Y4D8 3996 aa12.23□□□□□ -0.45
MRPL28-207ENST00000461550 GGTLC3B5MD39 225 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 ZNF324O75467 553 aaPredicted RBP12.22□□□□□ -0.45
MRPL28-207ENST00000461550 MT-ND4LP03901 98 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 GPX1P07203 203 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 ZFAND2AQ8N6M9 145 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 DNAH2Q9P225 4427 aa12.22□□□□□ -0.45
MRPL28-207ENST00000461550 A0A1W2PRE2 83 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 SFTA3P0C7M3 94 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 CRISP2P16562 243 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.45
MRPL28-207ENST00000461550 OR5I1Q13606 314 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 Q6ZTI0 123 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 ZNF492Q9P255 531 aa12.21□□□□□ -0.45
MRPL28-207ENST00000461550 PAGE4O60829 102 aa12.21□□□□□ -0.46
MRPL28-207ENST00000461550 CST9LP1Q5W188 147 aa12.21□□□□□ -0.46
MRPL28-207ENST00000461550 SGK494Q96LW2 274 aa12.21□□□□□ -0.46
MRPL28-207ENST00000461550 ATG101Q9BSB4 218 aa12.21□□□□□ -0.46
MRPL28-207ENST00000461550 RTL8CO15255 209 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 HOXA5P20719 270 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 ZNF138P52744 262 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 C5orf17Q8NAS9 161 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
MRPL28-207ENST00000461550 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
MRPL28-207ENST00000461550 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
MRPL28-207ENST00000461550 A0A0J9YY99 117 aa12.19□□□□□ -0.46
MRPL28-207ENST00000461550 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
MRPL28-207ENST00000461550 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
MRPL28-207ENST00000461550 TCRAP04437 139 aa12.18□□□□□ -0.46
MRPL28-207ENST00000461550 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
MRPL28-207ENST00000461550 Q6ZR54 194 aa12.18□□□□□ -0.46
MRPL28-207ENST00000461550 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
MRPL28-207ENST00000461550 FAT2Q9NYQ8 4349 aa12.18□□□□□ -0.46
MRPL28-207ENST00000461550 S100A6P06703 90 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 S100PP25815 95 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 RHEBQ15382 184 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 ARL6IP6Q8N6S5 226 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 HIST1H2BAQ96A08 127 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 LINC00467Q9BRT7 94 aa12.17□□□□□ -0.46
MRPL28-207ENST00000461550 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
MRPL28-207ENST00000461550 PPT1P50897 306 aa12.16□□□□□ -0.46
MRPL28-207ENST00000461550 ANXA2RQ3ZCQ2 193 aa12.16□□□□□ -0.46
MRPL28-207ENST00000461550 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
MRPL28-207ENST00000461550 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 TRAV34A0A0B4J273 112 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 TCL1AP56279 114 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 MUC21Q5SSG8 566 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 MUC4Q99102 2169 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 DNAH17Q9UFH2 4485 aa12.15□□□□□ -0.46
MRPL28-207ENST00000461550 K7EQM0 130 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 PEX7O00628 323 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 IFNA1P01562 189 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 CCL18P55774 89 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 SNRPEP62304 92 aaKnown RBP12.14□□□□□ -0.47
MRPL28-207ENST00000461550 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
MRPL28-207ENST00000461550 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 SERTM2A0A1B0GWG4 89 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 BCL2P10415 239 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
MRPL28-207ENST00000461550 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
MRPL28-207ENST00000461550 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
MRPL28-207ENST00000461550 FAM3BP58499 235 aaPredicted RBP12.13□□□□□ -0.47
MRPL28-207ENST00000461550 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 C7orf77A4D0Y5 90 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 F6UZH7 168 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 SPINK4O60575 86 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 RAB5AP20339 215 aa12.12□□□□□ -0.47
MRPL28-207ENST00000461550 IBA57Q5T440 356 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms