RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF503Q96F45 646 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
USP39-210ENST00000459775 HIGD1AQ9Y241 93 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 ARL14EPLP0DKL9 152 aa7.84□□□□□ -1.15
USP39-210ENST00000459775 RPL35AP18077 110 aaKnown RBP7.84□□□□□ -1.15
USP39-210ENST00000459775 FAM167A-AS1Q96KT0 104 aa7.84□□□□□ -1.15
USP39-210ENST00000459775 SLC25A2Q9BXI2 301 aa7.84□□□□□ -1.15
USP39-210ENST00000459775 GFI1BQ5VTD9 330 aa7.84□□□□□ -1.16
USP39-210ENST00000459775 IL17DQ8TAD2 202 aa7.84□□□□□ -1.16
USP39-210ENST00000459775 DLX4Q92988 240 aaPredicted RBP7.84□□□□□ -1.16
USP39-210ENST00000459775 ZNF747Q9BV97 191 aa7.84□□□□□ -1.16
USP39-210ENST00000459775 KCNIP2Q9NS61 270 aa7.84□□□□□ -1.16
USP39-210ENST00000459775 FUT9Q9Y231 359 aa7.84□□□□□ -1.16
USP39-210ENST00000459775 B4DEV8 164 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 LEPP41159 167 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 EMP1P54849 157 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 SRSF3P84103 164 aaKnown RBP7.83□□□□□ -1.16
USP39-210ENST00000459775 TMEM183BQ1AE95 376 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 C17orf77Q96MU5 243 aa7.83□□□□□ -1.16
USP39-210ENST00000459775 CTXND1A0A1B0GTU2 59 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 CCL24O00175 119 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 NDUFA4O00483 81 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
USP39-210ENST00000459775 GNG5P63218 68 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 TMEM190Q8WZ59 177 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 LINC00477Q96M19 166 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 RARRES2Q99969 163 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 RABAC1Q9UI14 185 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 IGKV3-7A0A075B6H7 116 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 LINC01619G3V211 115 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 OXTP01178 125 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 RPS10P46783 165 aaKnown RBP7.82□□□□□ -1.16
USP39-210ENST00000459775 KLF5Q13887 457 aaPredicted RBP7.82□□□□□ -1.16
USP39-210ENST00000459775 TEX43Q6ZNM6 134 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 MBD3L1Q8WWY6 194 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 MLST8Q9BVC4 326 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 RPS10P5Q9NQ39 176 aa7.82□□□□□ -1.16
USP39-210ENST00000459775 H3BQ15 152 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 H3BRN7 92 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 NPPCP23582 126 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 CD164Q04900 197 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 FAM106AQ4KMX7 169 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 UFSP1Q6NVU6 142 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 GPHB5Q86YW7 130 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 OR2K2Q8NGT1 345 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 TMEM18Q96B42 140 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 UQCR10Q9UDW1 63 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 C9JAW5 83 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 METTL26Q96S19 204 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 SAMD10Q9BYL1 202 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 TECRQ9NZ01 308 aaKnown RBP7.81□□□□□ -1.16
USP39-210ENST00000459775 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 SMAD5-AS1Q9Y6J3 95 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
USP39-210ENST00000459775 BUB3O43684 328 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 CRYBB3P26998 211 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 GCHFRP30047 84 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
USP39-210ENST00000459775 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 RHPN1-AS1Q9BWJ2 59 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
USP39-210ENST00000459775 C7orf77A4D0Y5 90 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 C9JQL5 133 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 CHEK1O14757 476 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 FXYD5Q96DB9 178 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 PAXXQ9BUH6 204 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 DAZ1Q9NQZ3 744 aaKnown RBP7.79□□□□□ -1.16
USP39-210ENST00000459775 YTHDF2Q9Y5A9 579 aaKnown RBP7.79□□□□□ -1.16
USP39-210ENST00000459775 U3KQE9 123 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 IGHV7-4-1A0A0J9YVY3 117 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
USP39-210ENST00000459775 CXorf1O96002 111 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 NTF3P20783 257 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 UBE2L3P68036 154 aaKnown RBP7.79□□□□□ -1.16
USP39-210ENST00000459775 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
USP39-210ENST00000459775 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
USP39-210ENST00000459775 C2orf70A6NJV1 201 aa7.78□□□□□ -1.16
USP39-210ENST00000459775 CBLN1P23435 193 aa7.78□□□□□ -1.16
USP39-210ENST00000459775 TRAV1-1A0A0B4J248 108 aa7.78□□□□□ -1.16
USP39-210ENST00000459775 NHLRC4P0CG21 123 aaPredicted RBP7.78□□□□□ -1.16
USP39-210ENST00000459775 HLA-DMBP28068 263 aa7.78□□□□□ -1.16
USP39-210ENST00000459775 ATP5G3P48201 142 aa7.78□□□□□ -1.16
USP39-210ENST00000459775 RPL11P62913 178 aaKnown RBP7.78□□□□□ -1.16
USP39-210ENST00000459775 PKD1L1Q8TDX9 2849 aa7.77□□□□□ -1.16
USP39-210ENST00000459775 IGLC2P0DOY2 106 aa7.77□□□□□ -1.17
USP39-210ENST00000459775 TAS2R45P59539 299 aa7.77□□□□□ -1.17
USP39-210ENST00000459775 AMMECR1LQ6DCA0 310 aa7.77□□□□□ -1.17
USP39-210ENST00000459775 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
USP39-210ENST00000459775 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
USP39-210ENST00000459775 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
USP39-210ENST00000459775 LGALS9O00182 355 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 NDUFB4O95168 129 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 DEFB1P60022 68 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms