RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 ABCA12Q86UK0 2595 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 FLNBO75369 2602 aaKnown RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 IGF2RP11717 2491 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 ZZEF1O43149 2961 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 SRCAPQ6ZRS2 3230 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 WDFY4Q6ZS81 3184 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 GCN1Q92616 2671 aaKnown RBP-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 TRAPPC8Q9Y2L5 1435 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 TMEM210A6NLX4 147 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 C5orf58C9J3I9 102 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 H3BQV1 296 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 FXYD1O00168 92 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 NDUFA6P56556 154 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 POU6F1Q14863 301 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 C3orf62Q6ZUJ4 267 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 TCTEX1D1Q8N7M0 179 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 DIRC1Q969H9 104 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 TAF9BQ9HBM6 251 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 ZFHX4Q86UP3 3567 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 ANKRD31Q8N7Z5 1873 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 PTPRZ1P23471 2315 aaPredicted RBP-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 UNC80Q8N2C7 3258 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 ZFHX3Q15911 3703 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 DNAH10Q8IVF4 4471 aa-0.36□□□□□ -2.47
SCARNA18-201ENST00000459004 PKD1L1Q8TDX9 2849 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 TRANK1O15050 2925 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 FRYQ5TBA9 3013 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 KNTC1P50748 2209 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 LOC400499M0QZD8 3231 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 A0A1W2PPB8 328 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 BBIP1A8MTZ0 92 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 KIR3DP1A8MWS1 328 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 IGF2P01344 180 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 IFNA1P01562 189 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 ISOC1Q96CN7 298 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 MGAQ8IWI9 3026 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 PIEZO2Q9H5I5 2752 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 TRPM7Q96QT4 1865 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 CSMD1Q96PZ7 3565 aa-0.37□□□□□ -2.47
SCARNA18-201ENST00000459004 AFDNP55196 1824 aaKnown RBP-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 BOD1L1Q8NFC6 3051 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 SPEGQ15772 3267 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 CMYA5Q8N3K9 4069 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 MUC3AQ02505 3323 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 LOC107984156A0A0G2JMH3 177 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 LOC101927531A0A1B0GV80 90 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 ARL5CA6NH57 179 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 HIGD1CA8MV81 97 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 MFSD11O43934 449 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 ARL17AQ8IVW1 177 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 TMEM229BQ8NBD8 167 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 CLEC2BQ92478 149 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 BORCS8Q96FH0 119 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 OTORQ9NRC9 128 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 IL20Q9NYY1 176 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 LAMTOR3Q9UHA4 124 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 LRBAP50851 2863 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 TRRAPQ9Y4A5 3859 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 FGD6Q6ZV73 1430 aa-0.38□□□□□ -2.47
SCARNA18-201ENST00000459004 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 ACACBO00763 2458 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 FREM2Q5SZK8 3169 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 A0A096LNT2 108 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 SPRR2DP22532 72 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 LTC4SQ16873 150 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 MRPL36Q9P0J6 103 aaKnown RBP-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 MYH2Q9UKX2 1941 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 MAP2P11137 1827 aaKnown RBP-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 TANC1Q9C0D5 1861 aa-0.39□□□□□ -2.47
SCARNA18-201ENST00000459004 RREB1Q92766 1687 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 DMXL1Q9Y485 3027 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 S100A6P06703 90 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 SAA1P0DJI8 122 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 FABP2P12104 132 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 TPT1P13693 172 aaKnown RBP-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 DNAJB13P59910 316 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 ARF6P62330 175 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 KLKP1Q107X0 134 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 CCSMST1Q4G0I0 132 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 MNS1Q8NEH6 495 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 OR5H6Q8NGV6 325 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 CHMP6Q96FZ7 201 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 LRTM1Q9HBL6 345 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 TMEM14BQ9NUH8 114 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 U3KQA8 63 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 DLC1Q96QB1 1528 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 PKD1L2Q7Z442 2459 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 ADGRG4Q8IZF6 3080 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 SPENQ96T58 3664 aaKnown RBP-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 SPTBN2O15020 2390 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 TECPR2O15040 1411 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 MTORP42345 2549 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 FAM208BQ5VWN6 2430 aa-0.4□□□□□ -2.47
SCARNA18-201ENST00000459004 TCOF1Q13428 1488 aaKnown RBP-0.41□□□□□ -2.47
SCARNA18-201ENST00000459004 CDK12Q9NYV4 1490 aaPredicted RBP-0.41□□□□□ -2.47
SCARNA18-201ENST00000459004 CFAP54Q96N23 3096 aa-0.41□□□□□ -2.47
SCARNA18-201ENST00000459004 EP400Q96L91 3159 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms