RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
VPS50-207ENST00000458530 HBBP68871 147 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 RIGQ13278 110 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 APRG1Q8IVJ8 170 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 FRZBQ92765 325 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 MCRIP2Q9BUT9 160 aaKnown RBP6.67□□□□□ -1.34
VPS50-207ENST00000458530 HLA-DRB4X5D2U9 266 aa6.67□□□□□ -1.34
VPS50-207ENST00000458530 A0A1B0GUT8 65 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 SNURFLB1AK76 121 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 KLLNB2CW77 178 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 OR11H12B2RN74 326 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 F2Z2F3 143 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 F6UB75 175 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 AMBPP02760 352 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 TRGC2P03986 189 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
VPS50-207ENST00000458530 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
VPS50-207ENST00000458530 CRIP1P50238 77 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 DEFB131AP59861 70 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 RAB4BP61018 213 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
VPS50-207ENST00000458530 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 KCNS1Q96KK3 526 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 PGLYRP4Q96LB8 373 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 KRTAP4-12Q9BQ66 201 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 FAM110AQ9BQ89 295 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 SELENOKQ9Y6D0 94 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
VPS50-207ENST00000458530 C7orf71A4D174 169 aa6.65□□□□□ -1.34
VPS50-207ENST00000458530 IGLV1-51P01701 117 aa6.65□□□□□ -1.34
VPS50-207ENST00000458530 PRB4P10163 310 aaPredicted RBP6.65□□□□□ -1.34
VPS50-207ENST00000458530 CTRLP40313 264 aa6.65□□□□□ -1.34
VPS50-207ENST00000458530 CDKN1BP46527 198 aa6.65□□□□□ -1.34
VPS50-207ENST00000458530 ZNF80P51504 273 aaPredicted RBP6.65□□□□□ -1.34
VPS50-207ENST00000458530 CLUHP3Q96NS8 147 aa6.65□□□□□ -1.34
VPS50-207ENST00000458530 TMSB15BA0A087X1C1 80 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 A8MTW9 85 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 SPINK4O60575 86 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 RNASE4P34096 147 aaKnown RBP6.64□□□□□ -1.35
VPS50-207ENST00000458530 NUTF2P61970 127 aaKnown RBP6.64□□□□□ -1.35
VPS50-207ENST00000458530 CACNG7P62955 275 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 FABP9Q0Z7S8 132 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 TMEM136Q6ZRR5 245 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 STHQ8IWL8 128 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 ZFP82Q8N141 532 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 GTSF1Q8WW33 167 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 TPPP3Q9BW30 176 aa6.64□□□□□ -1.35
VPS50-207ENST00000458530 ZNF256Q9Y2P7 627 aaPredicted RBP6.64□□□□□ -1.35
VPS50-207ENST00000458530 G3V4G9 280 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 H3BMM0 161 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 J3KRW8 73 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 AGRNO00468 2067 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 APCSP02743 223 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 IGLC6P0CF74 106 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 GZMBP10144 247 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 S100A4P26447 101 aaKnown RBP6.63□□□□□ -1.35
VPS50-207ENST00000458530 ASIPP42127 132 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 GDF5OSQ5U4N7 250 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 FAM159AQ6UWV7 190 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 C20orf144Q9BQM9 153 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 NAGKQ9UJ70 344 aa6.63□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BKO60814 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BJP06899 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 OR5AL1P0C617 328 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 TRGC1P0CF51 173 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BOP23527 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BBP33778 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 CAMPP49913 170 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BDP58876 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 DEFB1P60022 68 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BCP62807 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST2H2BEQ16778 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 ODF3L2Q3SX64 289 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.62□□□□□ -1.35
VPS50-207ENST00000458530 DNLZQ5SXM8 178 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 PRR9Q5T870 116 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 LYZL1Q6UWQ5 148 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 GTSCR1Q86UQ5 136 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 GATD1Q8NB37 220 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BHQ93079 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BNQ99877 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 HIST1H2BMQ99879 126 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 SORL1Q92673 2214 aa6.62□□□□□ -1.35
VPS50-207ENST00000458530 TRGV11A0A075B6L2 103 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 IGKV3D-20A0A0C4DH25 116 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 KNCNA6PVL3 124 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 INSP01308 110 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 IGKV3-20P01619 116 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms