RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 CBY3A6NI87 242 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 DEFB4AO15263 64 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 TYMSP04818 313 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 LINC01559Q495D7 138 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 TMEM263Q8WUH6 116 aaKnown RBP12.1□□□□□ -0.47
TRIM39-211ENST00000458516 C16orf74Q96GX8 76 aa12.1□□□□□ -0.47
TRIM39-211ENST00000458516 A0A0J9YWU9 116 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 C19orf71A6NCJ1 209 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 KCNS1Q96KK3 526 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
TRIM39-211ENST00000458516 M0R036 132 aa12.08□□□□□ -0.48
TRIM39-211ENST00000458516 GNRH2O43555 120 aa12.08□□□□□ -0.48
TRIM39-211ENST00000458516 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.48
TRIM39-211ENST00000458516 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
TRIM39-211ENST00000458516 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
TRIM39-211ENST00000458516 TRGV11A0A075B6L2 103 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 TMEM189A5PLL7 270 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 B4DEV8 164 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 ORM1P02763 201 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 RPL23P62829 140 aaKnown RBP12.07□□□□□ -0.48
TRIM39-211ENST00000458516 RPL19P84098 196 aaKnown RBP12.07□□□□□ -0.48
TRIM39-211ENST00000458516 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
TRIM39-211ENST00000458516 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
TRIM39-211ENST00000458516 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 EMP1P54849 157 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 ZNF415Q09FC8 603 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
TRIM39-211ENST00000458516 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
TRIM39-211ENST00000458516 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 GSN-AS1Q9NRJ2 163 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 MDFICQ9P1T7 246 aa12.06□□□□□ -0.48
TRIM39-211ENST00000458516 MUC4Q99102 2169 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 TMSB15BA0A087X1C1 80 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 TCL1AP56279 114 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 NUDT10Q8NFP7 164 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 ISOC2Q96AB3 205 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 NUDT11Q96G61 164 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 CELA1Q9UNI1 258 aa12.05□□□□□ -0.48
TRIM39-211ENST00000458516 P01737 135 aa12.04□□□□□ -0.48
TRIM39-211ENST00000458516 ADIRFQ15847 76 aa12.04□□□□□ -0.48
TRIM39-211ENST00000458516 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
TRIM39-211ENST00000458516 FAM231DQ6ZW35 169 aa12.04□□□□□ -0.48
TRIM39-211ENST00000458516 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-211ENST00000458516 GRIFINA4D1Z8 144 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 SNURFLB1AK76 121 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 CXCL1P09341 107 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 RNASE3P12724 160 aaKnown RBP12.03□□□□□ -0.48
TRIM39-211ENST00000458516 DAZ2Q13117 558 aaKnown RBP12.03□□□□□ -0.48
TRIM39-211ENST00000458516 FAM222AQ5U5X8 452 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
TRIM39-211ENST00000458516 DKK2Q9UBU2 259 aa12.03□□□□□ -0.48
TRIM39-211ENST00000458516 STAB2Q8WWQ8 2551 aa12.02□□□□□ -0.48
TRIM39-211ENST00000458516 F8W036 122 aa12.02□□□□□ -0.49
TRIM39-211ENST00000458516 ASIPP42127 132 aa12.02□□□□□ -0.49
TRIM39-211ENST00000458516 SEC11CQ9BY50 192 aa12.02□□□□□ -0.49
TRIM39-211ENST00000458516 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.49
TRIM39-211ENST00000458516 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
TRIM39-211ENST00000458516 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
TRIM39-211ENST00000458516 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
TRIM39-211ENST00000458516 TEX48A0A1B0GUV7 120 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 CXorf65A6NEN9 183 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 H3BVH4 76 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 GATCO43716 136 aaKnown RBP12□□□□□ -0.49
TRIM39-211ENST00000458516 SPINK4O60575 86 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 SPART-AS1P0CW21 52 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 GZMBP10144 247 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
TRIM39-211ENST00000458516 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
TRIM39-211ENST00000458516 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 SLC7A5P1Q8MH63 180 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 SFRP2Q96HF1 295 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 SPXQ9BT56 116 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 IL36BQ9NZH7 164 aa12□□□□□ -0.49
TRIM39-211ENST00000458516 PNRC1Q12796 327 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-211ENST00000458516 Q6ZTI0 123 aa11.99□□□□□ -0.49
TRIM39-211ENST00000458516 C11orf45Q8TAV5 145 aa11.99□□□□□ -0.49
TRIM39-211ENST00000458516 SCRT2Q9NQ03 307 aa11.99□□□□□ -0.49
TRIM39-211ENST00000458516 MRPL16Q9NX20 251 aaKnown RBP11.99□□□□□ -0.49
TRIM39-211ENST00000458516 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
TRIM39-211ENST00000458516 TGP01266 2768 aa11.99□□□□□ -0.49
TRIM39-211ENST00000458516 M0R2P5 195 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
TRIM39-211ENST00000458516 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 CT83Q5H943 113 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 C15orf54Q8N8G6 183 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 OR10G8Q8NGN5 311 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms