RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 TMEM30BQ3MIR4 351 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 GUSBP11Q6P575 273 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
HMGB4-202ENST00000458277 LINC00305Q7Z4B0 112 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 SAP25Q8TEE9 199 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 C10orf105Q8TEF2 133 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 C1orf159Q96HA4 380 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 SCGB3A1Q96QR1 104 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 TMEM14BQ9NUH8 114 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 SLC25A15Q9Y619 301 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 KIAA1549Q9HCM3 1950 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 ADAMTS9Q9P2N4 1935 aa4.29□□□□□ -1.72
HMGB4-202ENST00000458277 HEATR5BQ9P2D3 2071 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 CDH23Q9H251 3354 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 IGLV3-32A0A0A0MS00 114 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 J3QT63 122 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 SCRG1O75711 98 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 GP9P14770 177 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 COX6B1P14854 86 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
HMGB4-202ENST00000458277 TCF15Q12870 199 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 CEMP1Q6PRD7 247 aaPredicted RBP4.28□□□□□ -1.72
HMGB4-202ENST00000458277 THAP8Q8NA92 274 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 MDS2Q8NDY4 140 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
HMGB4-202ENST00000458277 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 Q9H3A6 140 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 RPUSD1Q9UJJ7 312 aaKnown RBP4.28□□□□□ -1.72
HMGB4-202ENST00000458277 COL6A3P12111 3177 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 EYSQ5T1H1 3165 aa4.28□□□□□ -1.72
HMGB4-202ENST00000458277 TRIOBPQ9H2D6 2365 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 TEX22C9J3V5 150 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 IGHV4-39P01824 125 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 CLPSP04118 112 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 IGKV3-11P04433 115 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
HMGB4-202ENST00000458277 CD24P25063 80 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 GFERP55789 205 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
HMGB4-202ENST00000458277 LYZL1Q6UWQ5 148 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 PRNTQ86SH4 94 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 PLXDC1Q8IUK5 500 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 ZCCHC24Q8N2G6 241 aaKnown RBP4.27□□□□□ -1.73
HMGB4-202ENST00000458277 FAM216BQ8N7L0 139 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 FLVCR1-AS1Q8TAF5 88 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 DCANP1Q8TF63 244 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 TOMM6Q96B49 74 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 TMEM141Q96I45 108 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 DAZ1Q9NQZ3 744 aaKnown RBP4.27□□□□□ -1.73
HMGB4-202ENST00000458277 ICOSQ9Y6W8 199 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 PRUNE2Q8WUY3 3088 aa4.27□□□□□ -1.73
HMGB4-202ENST00000458277 ARID1AO14497 2285 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 PHF3Q92576 2039 aaKnown RBP4.26□□□□□ -1.73
HMGB4-202ENST00000458277 TRAV41A0A0B4J266 112 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 IGHV1-58A0A0C4DH39 117 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 EPOPA6NHQ4 379 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 LINC01548A6NM66 108 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 USP17L23D6RBM5 183 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 M0R3E3 92 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 OXTP01178 125 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 FREM3P0C091 2139 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 VPREB1P12018 145 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 PDE6HQ13956 83 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 DAZAP2Q15038 168 aaPredicted RBP4.26□□□□□ -1.73
HMGB4-202ENST00000458277 SFTA2Q6UW10 78 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 LINC00322Q6ZN03 302 aaPredicted RBP4.26□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF826PQ6ZT77 177 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 VKORC1L1Q8N0U8 176 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 DYNLRB2Q8TF09 96 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 PRR25Q96S07 402 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 SLC50A1Q9BRV3 221 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 C16orf95Q9H693 158 aa4.26□□□□□ -1.73
HMGB4-202ENST00000458277 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 IGHV1-45A0A0A0MS14 117 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 IQCF6A8MYZ5 107 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 NXPH4O95158 308 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 DNAL4O96015 105 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 CRIP2P52943 208 aaPredicted RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 HILS1P60008 231 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 RPL11P62913 178 aaKnown RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 RPS21P63220 83 aaKnown RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 HOXA4Q00056 320 aaPredicted RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 CFHR1Q03591 330 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
HMGB4-202ENST00000458277 ERCC8Q13216 396 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 SPINK9Q5DT21 86 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 X6R8D5 127 aa4.25□□□□□ -1.73
HMGB4-202ENST00000458277 XIRP2A4UGR9 3374 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 PTPRBP23467 1997 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 PCDH15Q96QU1 1955 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms