RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SHANK2-AS3Q9BTD1 123 aa9.15□□□□□ -0.95
SYNE2-207ENST00000458046 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.95
SYNE2-207ENST00000458046 HAX1O00165 279 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 KLRD1Q13241 179 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 HES1Q14469 280 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 OR1N2Q8NGR9 330 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 CHCHD1Q96BP2 118 aaKnown RBP9.14□□□□□ -0.95
SYNE2-207ENST00000458046 PMCHL2Q9BQD1 86 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 ANKHD1Q8IWZ3 2542 aaKnown RBP9.14□□□□□ -0.95
SYNE2-207ENST00000458046 CRIP1P50238 77 aa9.14□□□□□ -0.95
SYNE2-207ENST00000458046 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 HLA-DRB1P01911 266 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 H3BRN7 92 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
SYNE2-207ENST00000458046 MUC21A0A0G2JKD1 596 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 MUC21A0A140T8X8 626 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 MUC21Q5SSG8 566 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 ZNF414Q96IQ9 312 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 DPM3Q9P2X0 92 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 IGHV2-70DA0A0C4DH43 119 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 CRXO43186 299 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-207ENST00000458046 RNF5Q99942 180 aa9.12□□□□□ -0.95
SYNE2-207ENST00000458046 A0A0G2JLM5 398 aa9.11□□□□□ -0.95
SYNE2-207ENST00000458046 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
SYNE2-207ENST00000458046 MED13LQ71F56 2210 aa9.11□□□□□ -0.95
SYNE2-207ENST00000458046 RIGQ13278 110 aa9.11□□□□□ -0.95
SYNE2-207ENST00000458046 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 NCBP2LA6PVI3 153 aaKnown RBP9.1□□□□□ -0.95
SYNE2-207ENST00000458046 MRPS12O15235 138 aaKnown RBP9.1□□□□□ -0.95
SYNE2-207ENST00000458046 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 MPV17L2Q567V2 206 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 NPFFR1Q9GZQ6 430 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 OR5AL1P0C617 328 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 LY6G5BQ8NDX9 201 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 PRSS3P2Q8NHM4 247 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 TMEM191AQ9H0A3 160 aa9.1□□□□□ -0.95
SYNE2-207ENST00000458046 IGHV3OR16-8A0A075B7F1 116 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 WI2-2373I1.2A0A1W2PRP0 233 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 IGFL4Q6B9Z1 124 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 ST20Q9HBF5 79 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 PTPRQQ9UMZ3 2332 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 IGHV3-35A0A0C4DH35 117 aa9.09□□□□□ -0.95
SYNE2-207ENST00000458046 HRNRQ86YZ3 2850 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-207ENST00000458046 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-207ENST00000458046 TRBV6-1A0A0K0K1D8 114 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-207ENST00000458046 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 FXYD7P58549 80 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 NDPQ00604 133 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 DYNAPQ8N1N2 210 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 OR11H6Q8NGC7 330 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 PIFOQ8TCI5 191 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 WNK2Q9Y3S1 2297 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 OR2T8A6NH00 312 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-207ENST00000458046 CCL21O00585 134 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 IFI27P40305 119 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-207ENST00000458046 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-207ENST00000458046 NPBQ8NG41 125 aa9.08□□□□□ -0.96
SYNE2-207ENST00000458046 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 TRAV30A0A087WSZ9 112 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 D6R8Y8 96 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 K7ENP7 123 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 NDUFA3O95167 84 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 NCR2O95944 276 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 SH2D1AO60880 128 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 CSN1S1P47710 185 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 AMN1Q8IY45 258 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 Q8TAT8 98 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 ARPC1AQ92747 370 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 C21orf62Q9NYP8 219 aa9.07□□□□□ -0.96
SYNE2-207ENST00000458046 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 ZNF747Q9BV97 191 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 DNHD1Q96M86 4753 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 Q6ZS46 218 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
SYNE2-207ENST00000458046 GAGE2BQ13066 116 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 GAGE2AQ6NT46 116 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 NAA38Q9BRA0 125 aaKnown RBP9.05□□□□□ -0.96
SYNE2-207ENST00000458046 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms