RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SRIP30626 198 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 OR10G4Q8NGN3 311 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 OR10G9Q8NGN4 311 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 OR10G7Q8NGN6 311 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 TMED6Q8WW62 240 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 BORCS7-ASMTA0A0B4J1R7 106 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 GNG5P63218 68 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 OR11H4Q8NGC9 324 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 NDFIP1Q9BT67 221 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 TREM1Q9NP99 234 aa10.79□□□□□ -0.68
CHCHD3-204ENST00000457942 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 ARL14EPLP0DKL9 152 aa10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 GYPEP15421 78 aa10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 LYPD5Q6UWN5 251 aa10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 PSMG3Q9BT73 122 aaPredicted RBP10.78□□□□□ -0.68
CHCHD3-204ENST00000457942 FAT1Q14517 4588 aa10.77□□□□□ -0.68
CHCHD3-204ENST00000457942 K7EQD1 137 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 EREGO14944 169 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 OR4C5Q8NGB2 326 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 RASL10AQ92737 203 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 SGK494Q96LW2 274 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
CHCHD3-204ENST00000457942 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 C9JCJ5 164 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 M0R2P5 195 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 GNRH2O43555 120 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 ORM1P02763 201 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 Q6ZNX1 250 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 IQCF2Q8IXL9 164 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 TXNDC17Q9BRA2 123 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 CYTL1Q9NRR1 136 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
CHCHD3-204ENST00000457942 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 K7EQM0 130 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 TYMSP04818 313 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 ARL6IP6Q8N6S5 226 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 RAB24Q969Q5 203 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
CHCHD3-204ENST00000457942 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
CHCHD3-204ENST00000457942 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
CHCHD3-204ENST00000457942 KCNRGQ8N5I3 272 aa10.74□□□□□ -0.69
CHCHD3-204ENST00000457942 C5orf17Q8NAS9 161 aa10.74□□□□□ -0.69
CHCHD3-204ENST00000457942 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 MBP02144 154 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 STAG3L2P0CL84 134 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 EVI2AP22794 236 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 SERF2P84101 59 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 ZFP69Q49AA0 526 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 Q5VSD8 79 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 ACTR3CQ9C0K3 210 aaPredicted RBP10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
CHCHD3-204ENST00000457942 TAAR5O14804 337 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 TCRAP04437 139 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 GCHFRP30047 84 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 PPT1P50897 306 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 FGF8P55075 233 aaPredicted RBP10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 ZNF345Q14585 488 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 ZNF726P1Q15940 193 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 AKR1C8PQ5T2L2 129 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 ZNF471Q9BX82 626 aaPredicted RBP10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
CHCHD3-204ENST00000457942 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 KANTRA0A1W2PQU2 76 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 HMSDA8MTL9 139 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 BCL2L11O43521 198 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 GCGP01275 180 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
CHCHD3-204ENST00000457942 PFDN1O60925 122 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 CXorf1O96002 111 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 ZNF876PQ49A33 203 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 TMUB2Q71RG4 321 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 MSRB1Q9NZV6 116 aa10.7□□□□□ -0.7
CHCHD3-204ENST00000457942 A0A0D9SG52 128 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 CTXND1A0A1B0GTU2 59 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 A0A1B0GVG6 124 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 CRYGDP07320 174 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 SUMO1P63165 101 aaKnown RBP10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 CYB561D1Q8N8Q1 229 aa10.69□□□□□ -0.7
CHCHD3-204ENST00000457942 IGHV3-73A0A0B4J1V6 119 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms