RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SRSF2Q01130 221 aaKnown RBP5.94□□□□□ -1.46
HDAC9-218ENST00000456174 NPIPB3Q92617 1050 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 FMC1Q96HJ9 113 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 SGK494Q96LW2 274 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 BBC3Q96PG8 261 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-218ENST00000456174 TRGV9Q99603 122 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 SPANXDQ9BXN6 97 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 ARHGAP32A7KAX9 2087 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 C15orf61A6NNL5 157 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 TCL1BO95988 128 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 EFNA4P52798 201 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 DLX1P56177 255 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 ZFP2Q6ZN57 461 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 GTSCR1Q86UQ5 136 aa5.94□□□□□ -1.46
HDAC9-218ENST00000456174 ATP5LO75964 103 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 HERVK_113P63121 156 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-218ENST00000456174 HES1Q14469 280 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 TWIST1Q15672 202 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 C3orf22Q8N5N4 141 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 LY6G5BQ8NDX9 201 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 OR11H6Q8NGC7 330 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 PAXXQ9BUH6 204 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 TMEM14BQ9NUH8 114 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 FOXA2Q9Y261 457 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-218ENST00000456174 LINC01549A6NIU2 74 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 ZNF785A8K8V0 405 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 IGLV1-47P01700 117 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
HDAC9-218ENST00000456174 HSPE1P61604 102 aaKnown RBP5.93□□□□□ -1.46
HDAC9-218ENST00000456174 GNG5P63218 68 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 C3orf56Q8N813 242 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 MYOZ3Q8TDC0 251 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 FLYWCH2Q96CP2 140 aaKnown RBP5.93□□□□□ -1.46
HDAC9-218ENST00000456174 FXYD5Q96DB9 178 aa5.93□□□□□ -1.46
HDAC9-218ENST00000456174 IGKV1OR2-108A0A075B7D4 117 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 D6R8Y8 96 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 UPK2O00526 184 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 SAA1P0DJI8 122 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-218ENST00000456174 COX7A1P24310 79 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 MORN5Q5VZ52 161 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 ORMDL3Q8N138 153 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 OR4C13Q8NGP0 309 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 LINC00526Q96FQ7 95 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 PRNDQ9UKY0 176 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 LOC389332A0A1B0GUA5 103 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 BUB1B-PAK6H3BSN5 160 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 UQCRQO14949 82 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 IGLC6P0CF74 106 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 FCER1GP30273 86 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 ZNF843Q8N446 348 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
HDAC9-218ENST00000456174 TNCP24821 2201 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 TMSB15BA0A087X1C1 80 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 TRAV2A0A0B4J234 112 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 TRBV6-1A0A0K0K1D8 114 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 SLC25A20O43772 301 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 PYYP10082 97 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 EMP1P54849 157 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 FAM104BQ5XKR9 115 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 Q8N1Y9 231 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 TMEM190Q8WZ59 177 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 ASCL2Q99929 193 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 TRAV8-1A0A0A6YYK1 113 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 IGHV3-72A0A0B4J1Y9 119 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 M0R1W7 72 aa5.91□□□□□ -1.46
HDAC9-218ENST00000456174 ENSAO43768 121 aaKnown RBP5.91□□□□□ -1.46
HDAC9-218ENST00000456174 IGHV1-3A0A0C4DH29 117 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 OOSP1A8MZH6 123 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 IGLV2-23P01705 113 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 CRYGDP07320 174 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 CD7P09564 240 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 ZFP36P26651 326 aaKnown RBP5.9□□□□□ -1.46
HDAC9-218ENST00000456174 FXYD7P58549 80 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 PRCDQ00LT1 54 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 Q86TA4 180 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 POM121L12Q8N7R1 296 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 IMUPQ9GZP8 106 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
HDAC9-218ENST00000456174 DOPEY1Q5JWR5 2465 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 FAM240AA0A1B0GVK7 77 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 NCBP2LA6PVI3 153 aaKnown RBP5.9□□□□□ -1.47
HDAC9-218ENST00000456174 LY6LH3BQJ8 138 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 H3BVH4 76 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 TIMM23O14925 209 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 IGHV4-39P01824 125 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 ORM1P02763 201 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 EBI3Q14213 229 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 VMA21Q3ZAQ7 101 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 C10orf126Q8N4M7 172 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 TMEM167AQ8TBQ9 72 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 IGFBPL1Q8WX77 278 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 DUX3Q96PT4 197 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms