RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
GPC1-206ENST00000455111 HAMPP81172 84 aa10.77□□□□□ -0.69
GPC1-206ENST00000455111 TMEM75Q8N9X5 138 aa10.77□□□□□ -0.69
GPC1-206ENST00000455111 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 M0R2P5 195 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 CDPF1Q6NVV7 123 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 SUN5Q8TC36 379 aa10.76□□□□□ -0.69
GPC1-206ENST00000455111 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 SSNA1O43805 119 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 IFNA5P01569 189 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 ORM1P02763 201 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 TAS2R45P59539 299 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 PTTG2Q9NZH5 202 aa10.75□□□□□ -0.69
GPC1-206ENST00000455111 STAG3L2P0CL84 134 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 STAG3L3P0CL85 134 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 Q5VSD8 79 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 PQLC2Q6ZP29 291 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 Q8N3U1 123 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 SLC25A29Q8N8R3 303 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 OR10G9Q8NGN4 311 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 OR10G7Q8NGN6 311 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 TREM1Q9NP99 234 aa10.74□□□□□ -0.69
GPC1-206ENST00000455111 RS1O15537 224 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 CRYGDP07320 174 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
GPC1-206ENST00000455111 Q5BKY6 102 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 CFAP126Q5VTH2 177 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 C9orf85Q96MD7 179 aa10.73□□□□□ -0.69
GPC1-206ENST00000455111 PGPEP1LA6NFU8 196 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 C9JCJ5 164 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
GPC1-206ENST00000455111 TCRAP04437 139 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 RNASE3P12724 160 aaKnown RBP10.72□□□□□ -0.69
GPC1-206ENST00000455111 TIRAPP58753 221 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 Q6ZSN1 163 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 CMTM2Q8TAZ6 248 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
GPC1-206ENST00000455111 Q9UF83 564 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 ALG5Q9Y673 324 aa10.72□□□□□ -0.69
GPC1-206ENST00000455111 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 INAFM2P0DMQ5 153 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 EVI2AP22794 236 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 WFDC2Q14508 124 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 OR2G3Q8NGZ4 309 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 ASB13Q8WXK3 278 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 RAB24Q969Q5 203 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 SH3BGRL3Q9H299 93 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 SDF2L1Q9HCN8 221 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
GPC1-206ENST00000455111 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 A0A1W2PPV4 95 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 IBA57-AS1B1ANH7 110 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 K7EP13 123 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 EREGO14944 169 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 PET100P0DJ07 73 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 GCSHP23434 173 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 ATP6V0CP27449 155 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 GCHFRP30047 84 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
GPC1-206ENST00000455111 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 HSD17B11Q8NBQ5 300 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
GPC1-206ENST00000455111 FBLL1A6NHQ2 334 aaKnown RBP10.69□□□□□ -0.7
GPC1-206ENST00000455111 GCGP01275 180 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 FAM74A1Q5RGS3 127 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 NHLRC2Q8NBF2 726 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 LINC00479Q96M42 142 aa10.69□□□□□ -0.7
GPC1-206ENST00000455111 SRRM2Q9UQ35 2752 aaKnown RBP10.68□□□□□ -0.7
GPC1-206ENST00000455111 IGKV3D-20A0A0C4DH25 116 aa10.68□□□□□ -0.7
GPC1-206ENST00000455111 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
GPC1-206ENST00000455111 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
GPC1-206ENST00000455111 KCNS1Q96KK3 526 aa10.68□□□□□ -0.7
GPC1-206ENST00000455111 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 AQP10Q96PS8 301 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 PSMG3Q9BT73 122 aaPredicted RBP10.67□□□□□ -0.7
GPC1-206ENST00000455111 JPT2Q9H910 190 aa10.67□□□□□ -0.7
GPC1-206ENST00000455111 PFN1P07737 140 aaKnown RBP10.66□□□□□ -0.7
GPC1-206ENST00000455111 PPT1P50897 306 aa10.66□□□□□ -0.7
GPC1-206ENST00000455111 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
GPC1-206ENST00000455111 FLI1Q01543 452 aaPredicted RBP10.66□□□□□ -0.7
GPC1-206ENST00000455111 UFSP1Q6NVU6 142 aa10.66□□□□□ -0.7
GPC1-206ENST00000455111 PRNTQ86SH4 94 aa10.66□□□□□ -0.7
GPC1-206ENST00000455111 C10orf126Q8N4M7 172 aa10.66□□□□□ -0.7
GPC1-206ENST00000455111 Q8N814 137 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms