RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NUDT11Q96G61 164 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 X6R8D5 127 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 MEGF8Q7Z7M0 2845 aa8.15□□□□□ -1.11
TRAF4-206ENST00000454852 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
TRAF4-206ENST00000454852 SPRY2O43597 315 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 P01737 135 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 ADIRFQ15847 76 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 DEFB135Q30KP9 77 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 PRR27Q6MZM9 219 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 ZNF493Q6ZR52 646 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
TRAF4-206ENST00000454852 SFRP2Q96HF1 295 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 LINC01587Q99440 93 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
TRAF4-206ENST00000454852 SCO1O75880 301 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 SNAPINO95295 136 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 MIFP14174 115 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 ERVFC1-1P60608 527 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 RPS20P60866 119 aaKnown RBP8.13□□□□□ -1.11
TRAF4-206ENST00000454852 C15orf54Q8N8G6 183 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 TMEM263Q8WUH6 116 aaKnown RBP8.13□□□□□ -1.11
TRAF4-206ENST00000454852 TMEM208Q9BTX3 173 aa8.13□□□□□ -1.11
TRAF4-206ENST00000454852 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
TRAF4-206ENST00000454852 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
TRAF4-206ENST00000454852 TRGV11A0A075B6L2 103 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 TMEM189A5PLL7 270 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 FAM231BA6NCW3 169 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 ORM1P02763 201 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 TYMSP04818 313 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 ATRAIDQ6UW56 229 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 IL17DQ8TAD2 202 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 RNASE8Q8TDE3 154 aaKnown RBP8.12□□□□□ -1.11
TRAF4-206ENST00000454852 ANAPC16Q96DE5 110 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 V9GYV3 84 aa8.12□□□□□ -1.11
TRAF4-206ENST00000454852 IGHV3-16A0A0C4DH30 117 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 XKRY2A2RUG3 117 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
TRAF4-206ENST00000454852 MT-ND4LP03901 98 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
TRAF4-206ENST00000454852 FOXA3P55318 350 aaPredicted RBP8.11□□□□□ -1.11
TRAF4-206ENST00000454852 RHEBQ15382 184 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 RRN3P1Q2M238 152 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 MUC21Q5SSG8 566 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 Q8NAQ8 132 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 OR2D3Q8NGH3 330 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
TRAF4-206ENST00000454852 CTDSP1Q9GZU7 261 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 GFRA4Q9GZZ7 299 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
TRAF4-206ENST00000454852 A0A087WWC5 75 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 CBY3A6NI87 242 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 ZNF705GA8MUZ8 300 aaPredicted RBP8.1□□□□□ -1.11
TRAF4-206ENST00000454852 A8MWL6 223 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 SNAI2O43623 268 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
TRAF4-206ENST00000454852 TCL1AP56279 114 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 RPL19P84098 196 aaKnown RBP8.1□□□□□ -1.11
TRAF4-206ENST00000454852 RNF212Q495C1 297 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 PTH2Q96A98 100 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 C9orf85Q96MD7 179 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
TRAF4-206ENST00000454852 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 IL36BQ9NZH7 164 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
TRAF4-206ENST00000454852 IGHV3OR16-12A0A075B7B8 117 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 C7orf77A4D0Y5 90 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 M0R036 132 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 GNRH2O43555 120 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 AZU1P20160 251 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 ASIPP42127 132 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
TRAF4-206ENST00000454852 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 IMMP2LQ96T52 175 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 SPXQ9BT56 116 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 NDUFAF3Q9BU61 184 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 ZMAT4Q9H898 229 aa8.09□□□□□ -1.11
TRAF4-206ENST00000454852 SMIM27A0A1W2PRY6 76 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 CTRLP40313 264 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 RETNQ9HD89 108 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 MDFICQ9P1T7 246 aa8.08□□□□□ -1.12
TRAF4-206ENST00000454852 IGHV4-4A0A075B6R2 117 aa8.07□□□□□ -1.12
TRAF4-206ENST00000454852 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms