RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 RBMY1FQ15415 496 aaKnown RBP6.27□□□□□ -1.41
COL28A1-205ENST00000453441 TDRG1Q3Y452 100 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 ZNF506Q5JVG8 444 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 IBA57Q5T440 356 aaKnown RBP6.27□□□□□ -1.41
COL28A1-205ENST00000453441 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 TRGV11A0A075B6L2 103 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 CXorf65A6NEN9 183 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 CBY3A6NI87 242 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 GCGP01275 180 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
COL28A1-205ENST00000453441 PRB4P10163 310 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-205ENST00000453441 FAM159AQ6UWV7 190 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 TMEM183AQ8IXX5 376 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
COL28A1-205ENST00000453441 TVP23CQ96ET8 276 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 BIN3Q9NQY0 253 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 MED9Q9NWA0 146 aa6.26□□□□□ -1.41
COL28A1-205ENST00000453441 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 TRAV34A0A0B4J273 112 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 FABP5P3A8MUU1 101 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 ZNF705GA8MUZ8 300 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-205ENST00000453441 SNURFLB1AK76 121 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 RPL35P42766 123 aaKnown RBP6.25□□□□□ -1.41
COL28A1-205ENST00000453441 ZNF415Q09FC8 603 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 DAZ2Q13117 558 aaKnown RBP6.25□□□□□ -1.41
COL28A1-205ENST00000453441 PRR9Q5T870 116 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 MUC7Q8TAX7 377 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 SGK494Q96LW2 274 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 LINC00479Q96M42 142 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
COL28A1-205ENST00000453441 SDF2L1Q9HCN8 221 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 TP53TG3Q9ULZ0 132 aa6.25□□□□□ -1.41
COL28A1-205ENST00000453441 TIMM8BQ9Y5J9 83 aaPredicted RBP6.25□□□□□ -1.41
COL28A1-205ENST00000453441 C9JCJ5 164 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 GNG4P50150 75 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 TOR2AQ5JU69 321 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 FAM162BQ5T6X4 162 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 BAGE2Q86Y30 109 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 C8orf49Q96NF6 230 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 SPXQ9BT56 116 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 DKK2Q9UBU2 259 aa6.24□□□□□ -1.41
COL28A1-205ENST00000453441 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 NUPR2A6NF83 97 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 HTN1P15515 57 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 EMP1P54849 157 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 TCL1AP56279 114 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 PEA15Q15121 130 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 LGALS9BQ3B8N2 356 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 CLLU1Q5K131 121 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 ZC2HC1AQ96GY0 325 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
COL28A1-205ENST00000453441 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 DEFB4AO15263 64 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 CXCL1P09341 107 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 AZU1P20160 251 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 ZNF80P51504 273 aaPredicted RBP6.22□□□□□ -1.41
COL28A1-205ENST00000453441 TCTAP57738 103 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 DAD1P61803 113 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 FAM74A3Q4VXF1 159 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 MUC21Q5SSG8 566 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 DNLZQ5SXM8 178 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 C11orf72Q8NBR9 251 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 C18orf15Q96N68 181 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 NAGKQ9UJ70 344 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
COL28A1-205ENST00000453441 KLK5Q9Y337 293 aaPredicted RBP6.22□□□□□ -1.41
COL28A1-205ENST00000453441 LY96Q9Y6Y9 160 aa6.22□□□□□ -1.41
COL28A1-205ENST00000453441 RAB19A4D1S5 217 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 SH2D1AO60880 128 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 PIK3CD-AS1Q5SR53 167 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 LINC00612Q8N6U2 182 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 PTH2Q96A98 100 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 FAM210BQ96KR6 192 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 DERL1Q9BUN8 251 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 PARLQ9H300 379 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
COL28A1-205ENST00000453441 GSN-AS1Q9NRJ2 163 aa6.21□□□□□ -1.42
COL28A1-205ENST00000453441 IGHV3-16A0A0C4DH30 117 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 B4DEV8 164 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 M0R2P5 195 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 SPINK4O60575 86 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 ORM1P02763 201 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 TYMSP04818 313 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 SRP19P09132 144 aaKnown RBP6.2□□□□□ -1.42
COL28A1-205ENST00000453441 ASIPP42127 132 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 CRIP1P50238 77 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
COL28A1-205ENST00000453441 RPS20P60866 119 aaKnown RBP6.2□□□□□ -1.42
COL28A1-205ENST00000453441 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
COL28A1-205ENST00000453441 PHLDA1Q8WV24 401 aaPredicted RBP6.2□□□□□ -1.42
COL28A1-205ENST00000453441 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms