RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TRGV11A0A075B6L2 103 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 A0A1W2PPQ1 181 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 GOLT1AQ6ZVE7 132 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 TMEM183AQ8IXX5 376 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 HSD17B11Q8NBQ5 300 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 STOML3Q8TAV4 291 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 NAGKQ9UJ70 344 aa8.9□□□□□ -0.99
CHD3-206ENST00000452447 C16orf90A8MZG2 172 aa8.89□□□□□ -0.99
CHD3-206ENST00000452447 CDC34P49427 236 aaPredicted RBP8.89□□□□□ -0.99
CHD3-206ENST00000452447 SERF2P84101 59 aa8.89□□□□□ -0.99
CHD3-206ENST00000452447 ARL6IP6Q8N6S5 226 aa8.89□□□□□ -0.99
CHD3-206ENST00000452447 SPXQ9BT56 116 aa8.89□□□□□ -0.99
CHD3-206ENST00000452447 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
CHD3-206ENST00000452447 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
CHD3-206ENST00000452447 HSPG2P98160 4391 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 TRGV4A0A0C4DH28 118 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 MBP02144 154 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 ARL14EPLP0DKL9 152 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 CRYBA4P53673 196 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 FHL2Q14192 279 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
CHD3-206ENST00000452447 OR2G3Q8NGZ4 309 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
CHD3-206ENST00000452447 TRAV8-1A0A0A6YYK1 113 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 LINC00862A6NCI5 91 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 IFNA7P01567 189 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 BTF3P20290 206 aaKnown RBP8.87□□□□□ -0.99
CHD3-206ENST00000452447 S100A12P80511 92 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 RPL7L1Q6DKI1 246 aaKnown RBP8.87□□□□□ -0.99
CHD3-206ENST00000452447 RASL10AQ92737 203 aa8.87□□□□□ -0.99
CHD3-206ENST00000452447 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 SIVA1O15304 175 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 SFTA3P0C7M3 94 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 SEC11BP0C7V7 166 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 GNG5P63218 68 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 TDRG1Q3Y452 100 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 RAB24Q969Q5 203 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 NDFIP1Q9BT67 221 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 SERTM2A0A1B0GWG4 89 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 F6UZH7 168 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 K7EQM0 130 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 RAB5CP51148 216 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 AKR1C8PQ5T2L2 129 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 PCNPQ8WW12 178 aaKnown RBP8.86□□□□□ -0.99
CHD3-206ENST00000452447 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 KCNS1Q96KK3 526 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 SDF2L1Q9HCN8 221 aa8.86□□□□□ -0.99
CHD3-206ENST00000452447 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 GNRH2O43555 120 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 NXPH4O95158 308 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 SRIP30626 198 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 C5orf17Q8NAS9 161 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 TVP23CQ96ET8 276 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 CYTL1Q9NRR1 136 aa8.85□□□□□ -0.99
CHD3-206ENST00000452447 IGHV3-16A0A0C4DH30 117 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 M0R2P5 195 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 CXorf1O96002 111 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 GCHFRP30047 84 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 ACTR3CQ9C0K3 210 aaPredicted RBP8.84□□□□□ -0.99
CHD3-206ENST00000452447 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
CHD3-206ENST00000452447 TRAV4A0A0B4J268 109 aa8.83□□□□□ -1
CHD3-206ENST00000452447 K7EQD1 137 aa8.83□□□□□ -1
CHD3-206ENST00000452447 ORM1P02763 201 aa8.83□□□□□ -1
CHD3-206ENST00000452447 TCRAP04437 139 aa8.83□□□□□ -1
CHD3-206ENST00000452447 TYMSP04818 313 aa8.83□□□□□ -1
CHD3-206ENST00000452447 GYPEP15421 78 aa8.83□□□□□ -1
CHD3-206ENST00000452447 LINC00315P59091 139 aa8.83□□□□□ -1
CHD3-206ENST00000452447 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
CHD3-206ENST00000452447 SH3BGRL3Q9H299 93 aa8.83□□□□□ -1
CHD3-206ENST00000452447 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
CHD3-206ENST00000452447 C9JCJ5 164 aa8.82□□□□□ -1
CHD3-206ENST00000452447 RAB14P61106 215 aa8.82□□□□□ -1
CHD3-206ENST00000452447 TEX261Q6UWH6 196 aa8.82□□□□□ -1
CHD3-206ENST00000452447 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
CHD3-206ENST00000452447 TXNDC17Q9BRA2 123 aa8.82□□□□□ -1
CHD3-206ENST00000452447 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
CHD3-206ENST00000452447 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
CHD3-206ENST00000452447 EPDR1Q9UM22 224 aa8.82□□□□□ -1
CHD3-206ENST00000452447 PSG8Q9UQ74 426 aa8.82□□□□□ -1
CHD3-206ENST00000452447 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
CHD3-206ENST00000452447 GGTLC3B5MD39 225 aa8.81□□□□□ -1
CHD3-206ENST00000452447 CDK2AP2O75956 126 aa8.81□□□□□ -1
CHD3-206ENST00000452447 GCGP01275 180 aa8.81□□□□□ -1
CHD3-206ENST00000452447 FLI1Q01543 452 aaPredicted RBP8.81□□□□□ -1
CHD3-206ENST00000452447 TOR2AQ5JU69 321 aa8.81□□□□□ -1
CHD3-206ENST00000452447 PRNTQ86SH4 94 aa8.81□□□□□ -1
CHD3-206ENST00000452447 CYB561D1Q8N8Q1 229 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms