RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RNF222A6NCQ9 220 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 F6UZH7 168 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 SFTA3P0C7M3 94 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 BTF3P20290 206 aaKnown RBP8.55□□□□□ -1.04
CPSF4-208ENST00000452047 GCHFRP30047 84 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 SERF2P84101 59 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 IQCF2Q8IXL9 164 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 SH3BGRL3Q9H299 93 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 NAGKQ9UJ70 344 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 LINC00862A6NCI5 91 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 SIVA1O15304 175 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 GNRH2O43555 120 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 NXPH4O95158 308 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 IFNA7P01567 189 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 MBP02144 154 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 TCRAP04437 139 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 TYMSP04818 313 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
CPSF4-208ENST00000452047 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 GGTLC3B5MD39 225 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 SMLR1H3BR10 107 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 K7EQD1 137 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 LINC00315P59091 139 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 MRPL23Q16540 153 aaKnown RBP8.53□□□□□ -1.04
CPSF4-208ENST00000452047 LYPD5Q6UWN5 251 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-208ENST00000452047 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 TNFSF18Q9UNG2 199 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
CPSF4-208ENST00000452047 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 G3V3Q6 166 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 M0R2P5 195 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 CXorf1O96002 111 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-208ENST00000452047 CLLU1Q5K131 121 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
CPSF4-208ENST00000452047 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 OR11H4Q8NGC9 324 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 TMEM167BQ9NRX6 74 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 C11orf21Q9P2W6 132 aa8.52□□□□□ -1.05
CPSF4-208ENST00000452047 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.05
CPSF4-208ENST00000452047 FXYD6-FXYD2A0A087WZ82 144 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
CPSF4-208ENST00000452047 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 LGALSLQ3ZCW2 172 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-208ENST00000452047 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 INO80EQ8NBZ0 244 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-208ENST00000452047 KCNS1Q96KK3 526 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 NDFIP1Q9BT67 221 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 ACTR3CQ9C0K3 210 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-208ENST00000452047 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 PSG8Q9UQ74 426 aa8.51□□□□□ -1.05
CPSF4-208ENST00000452047 K7EQM0 130 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 ORM1P02763 201 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 GYPEP15421 78 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 SRIP30626 198 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 FLI1Q01543 452 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-208ENST00000452047 CYB561D1Q8N8Q1 229 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 TMEM75Q8N9X5 138 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 OR4C5Q8NGB2 326 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
CPSF4-208ENST00000452047 BORCS7-ASMTA0A0B4J1R7 106 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 A0A1W2PRE2 83 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 C9JCJ5 164 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 GCGP01275 180 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
CPSF4-208ENST00000452047 RAB14P61106 215 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
CPSF4-208ENST00000452047 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
CPSF4-208ENST00000452047 LOC100131303A0A0U1RQF7 123 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 CTXND1A0A1B0GTU2 59 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
CPSF4-208ENST00000452047 TAAR5O14804 337 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 GATA1P15976 413 aaPredicted RBP8.48□□□□□ -1.05
CPSF4-208ENST00000452047 SMUG1Q53HV7 270 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 DPPA3Q6W0C5 159 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 PRNTQ86SH4 94 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 TXNDC17Q9BRA2 123 aa8.48□□□□□ -1.05
CPSF4-208ENST00000452047 ZNF876PQ49A33 203 aa8.47□□□□□ -1.05
CPSF4-208ENST00000452047 LINC00479Q96M42 142 aa8.47□□□□□ -1.05
CPSF4-208ENST00000452047 TNFRSF18Q9Y5U5 241 aa8.47□□□□□ -1.05
CPSF4-208ENST00000452047 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
CPSF4-208ENST00000452047 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 K7EP13 123 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 RS1O15537 224 aa8.46□□□□□ -1.06
CPSF4-208ENST00000452047 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms