RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 OSTCQ9NRP0 149 aa15.52■□□□□ 0.08
C9orf3-208ENST00000451893 AMBPP02760 352 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 HTN3P15516 51 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 FAM231DQ6ZW35 169 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 COX8CQ7Z4L0 72 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 Q86TA4 180 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 C15orf54Q8N8G6 183 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 OR10G8Q8NGN5 311 aa15.51■□□□□ 0.07
C9orf3-208ENST00000451893 PGPEP1LA6NFU8 196 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 H7BYZ3 331 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 K7EN84 100 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 INSP01308 110 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 P0DMU3 169 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 FAM231AP0DMU4 169 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 FAM231CP0DMU5 169 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 FAM222AQ5U5X8 452 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 IGFL4Q6B9Z1 124 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 PRNTQ86SH4 94 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 UBE2DNLQ8IWF7 75 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 RNF182Q8N6D2 247 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 IMMP2LQ96T52 175 aa15.5■□□□□ 0.07
C9orf3-208ENST00000451893 MGST1P10620 155 aaKnown RBP15.49■□□□□ 0.07
C9orf3-208ENST00000451893 C9orf47Q6ZRZ4 202 aa15.49■□□□□ 0.07
C9orf3-208ENST00000451893 LINC00477Q96M19 166 aa15.49■□□□□ 0.07
C9orf3-208ENST00000451893 NDFIP1Q9BT67 221 aa15.49■□□□□ 0.07
C9orf3-208ENST00000451893 ZNF492Q9P255 531 aa15.49■□□□□ 0.07
C9orf3-208ENST00000451893 LENEPQ9Y5L5 61 aa15.49■□□□□ 0.07
C9orf3-208ENST00000451893 ERVFC1-1P60608 527 aa15.48■□□□□ 0.07
C9orf3-208ENST00000451893 HIST1H1AQ02539 215 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-208ENST00000451893 SPINK13Q1W4C9 94 aa15.48■□□□□ 0.07
C9orf3-208ENST00000451893 TMEM88Q6PEY1 159 aa15.48■□□□□ 0.07
C9orf3-208ENST00000451893 TRAV8-1A0A0A6YYK1 113 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 TMEM78Q5T7P6 136 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 CBLN2Q8IUK8 224 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 OR10J6PQ8NGY7 276 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 BTF3L4Q96K17 158 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 DKK2Q9UBU2 259 aa15.47■□□□□ 0.07
C9orf3-208ENST00000451893 KMT2AQ03164 3969 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 IGKV2-40A0A087WW87 121 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-208ENST00000451893 TRBV7-9A0A0J9YWB2 115 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 M0R2Z0 102 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 IGKV2D-40P01614 121 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-208ENST00000451893 S100PP25815 95 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 DAD1P61803 113 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 IBA57Q5T440 356 aaKnown RBP15.46■□□□□ 0.07
C9orf3-208ENST00000451893 C1orf158Q8N1D5 194 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 SGK494Q96LW2 274 aa15.46■□□□□ 0.07
C9orf3-208ENST00000451893 CT45A10P0DMU9 189 aa15.45■□□□□ 0.06
C9orf3-208ENST00000451893 ZNF138P52744 262 aa15.45■□□□□ 0.06
C9orf3-208ENST00000451893 OR5I1Q13606 314 aa15.45■□□□□ 0.06
C9orf3-208ENST00000451893 DAZAP1Q96EP5 407 aaKnown RBP15.45■□□□□ 0.06
C9orf3-208ENST00000451893 VGLL1Q99990 258 aa15.45■□□□□ 0.06
C9orf3-208ENST00000451893 PRAC2D3DTV9 90 aa15.44■□□□□ 0.06
C9orf3-208ENST00000451893 KCNIP4Q6PIL6 250 aa15.44■□□□□ 0.06
C9orf3-208ENST00000451893 AGPAT4-IT1Q9H0P7 198 aa15.44■□□□□ 0.06
C9orf3-208ENST00000451893 NPIPB6E9PJ23 425 aa15.43■□□□□ 0.06
C9orf3-208ENST00000451893 POM121L12Q8N7R1 296 aa15.43■□□□□ 0.06
C9orf3-208ENST00000451893 OR8A1Q8NGG7 326 aa15.43■□□□□ 0.06
C9orf3-208ENST00000451893 FAM210BQ96KR6 192 aa15.43■□□□□ 0.06
C9orf3-208ENST00000451893 TRAV9-1A0A075B6T8 112 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 C19orf71A6NCJ1 209 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 GATCO43716 136 aaKnown RBP15.42■□□□□ 0.06
C9orf3-208ENST00000451893 PFN1P07737 140 aaKnown RBP15.42■□□□□ 0.06
C9orf3-208ENST00000451893 SMUG1Q53HV7 270 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 CT83Q5H943 113 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 AMTNQ6UX39 209 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 NHLRC2Q8NBF2 726 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 NUDT10Q8NFP7 164 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 NUDT11Q96G61 164 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 V9GYV3 84 aa15.42■□□□□ 0.06
C9orf3-208ENST00000451893 TRAV12-2A0A075B6T6 113 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 COLCA2A8K830 154 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 ZNF705GA8MUZ8 300 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-208ENST00000451893 HTN1P15515 57 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 YPEL4Q96NS1 127 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 LINC01587Q99440 93 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 IL36BQ9NZH7 164 aa15.41■□□□□ 0.06
C9orf3-208ENST00000451893 A8MTW9 85 aa15.4■□□□□ 0.06
C9orf3-208ENST00000451893 P01737 135 aa15.4■□□□□ 0.06
C9orf3-208ENST00000451893 RPL19P84098 196 aaKnown RBP15.4■□□□□ 0.06
C9orf3-208ENST00000451893 ELOBQ15370 118 aa15.4■□□□□ 0.06
C9orf3-208ENST00000451893 ZC2HC1AQ96GY0 325 aa15.4■□□□□ 0.06
C9orf3-208ENST00000451893 RNASE7Q9H1E1 156 aaKnown RBP15.4■□□□□ 0.06
C9orf3-208ENST00000451893 TRBV24-1A0A075B6N3 115 aa15.39■□□□□ 0.05
C9orf3-208ENST00000451893 ERCC8Q13216 396 aa15.39■□□□□ 0.05
C9orf3-208ENST00000451893 FAM162BQ5T6X4 162 aa15.39■□□□□ 0.05
C9orf3-208ENST00000451893 PRR27Q6MZM9 219 aa15.39■□□□□ 0.05
C9orf3-208ENST00000451893 ODF3Q96PU9 254 aa15.39■□□□□ 0.05
C9orf3-208ENST00000451893 FAM231BA6NCW3 169 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 A8MWL6 223 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 M0R2N4 97 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 DEFB130BP0DP73 79 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 DEFB130AP0DP74 79 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 TMEM256Q8N2U0 113 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 PYGO2Q9BRQ0 406 aa15.38■□□□□ 0.05
C9orf3-208ENST00000451893 RPP21Q9H633 154 aaKnown RBP15.38■□□□□ 0.05
C9orf3-208ENST00000451893 LYRM9A8MSI8 78 aa15.37■□□□□ 0.05
C9orf3-208ENST00000451893 FABP5P3A8MUU1 101 aa15.37■□□□□ 0.05
C9orf3-208ENST00000451893 PRB4P10163 310 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-208ENST00000451893 CDKN1BP46527 198 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms