RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 IGKV3D-20A0A0C4DH25 116 aa17.19■□□□□ 0.34
CPSF4-207ENST00000451876 GNRH2O43555 120 aa17.19■□□□□ 0.34
CPSF4-207ENST00000451876 TYMSP04818 313 aa17.19■□□□□ 0.34
CPSF4-207ENST00000451876 PEA15Q15121 130 aa17.19■□□□□ 0.34
CPSF4-207ENST00000451876 GSN-AS1Q9NRJ2 163 aa17.19■□□□□ 0.34
CPSF4-207ENST00000451876 C9JCJ5 164 aa17.18■□□□□ 0.34
CPSF4-207ENST00000451876 MDFICQ9P1T7 246 aa17.18■□□□□ 0.34
CPSF4-207ENST00000451876 MGST1P10620 155 aaKnown RBP17.18■□□□□ 0.34
CPSF4-207ENST00000451876 C11orf45Q8TAV5 145 aa17.18■□□□□ 0.34
CPSF4-207ENST00000451876 SMIM12Q96EX1 92 aa17.18■□□□□ 0.34
CPSF4-207ENST00000451876 NOP10Q9NPE3 64 aaKnown RBP17.18■□□□□ 0.34
CPSF4-207ENST00000451876 M0R036 132 aa17.17■□□□□ 0.34
CPSF4-207ENST00000451876 NANOS2P60321 138 aaKnown RBP17.17■□□□□ 0.34
CPSF4-207ENST00000451876 IBA57Q5T440 356 aaKnown RBP17.17■□□□□ 0.34
CPSF4-207ENST00000451876 KCNS1Q96KK3 526 aa17.17■□□□□ 0.34
CPSF4-207ENST00000451876 SMDT1Q9H4I9 107 aa17.17■□□□□ 0.34
CPSF4-207ENST00000451876 SDF2L1Q9HCN8 221 aa17.17■□□□□ 0.34
CPSF4-207ENST00000451876 TIMM8BQ9Y5J9 83 aaPredicted RBP17.17■□□□□ 0.34
CPSF4-207ENST00000451876 SNURFLB1AK76 121 aa17.16■□□□□ 0.34
CPSF4-207ENST00000451876 TCL1AP56279 114 aa17.16■□□□□ 0.34
CPSF4-207ENST00000451876 SMIM7Q9BQ49 75 aa17.16■□□□□ 0.34
CPSF4-207ENST00000451876 TRGV11A0A075B6L2 103 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 CXorf65A6NEN9 183 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 ORM1P02763 201 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 SPART-AS1P0CW21 52 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 OCC1Q8TAD7 63 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 CSMD3Q7Z407 3707 aa17.15■□□□□ 0.34
CPSF4-207ENST00000451876 IGHV3-16A0A0C4DH30 117 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 ZNF727A8MUV8 499 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 K7EN84 100 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 ZNF415Q09FC8 603 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 OR5I1Q13606 314 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 B4DEV8 164 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 ZNF575Q86XF7 245 aa17.14■□□□□ 0.33
CPSF4-207ENST00000451876 LYRM9A8MSI8 78 aa17.13■□□□□ 0.33
CPSF4-207ENST00000451876 KRBOX1C9JBD0 128 aa17.13■□□□□ 0.33
CPSF4-207ENST00000451876 RPL19P84098 196 aaKnown RBP17.13■□□□□ 0.33
CPSF4-207ENST00000451876 DAZ2Q13117 558 aaKnown RBP17.13■□□□□ 0.33
CPSF4-207ENST00000451876 C12orf74Q32Q52 190 aa17.13■□□□□ 0.33
CPSF4-207ENST00000451876 LINC01559Q495D7 138 aa17.13■□□□□ 0.33
CPSF4-207ENST00000451876 Q6ZTC4 211 aa17.12■□□□□ 0.33
CPSF4-207ENST00000451876 TMSB15BA0A087X1C1 80 aa17.11■□□□□ 0.33
CPSF4-207ENST00000451876 C19orf71A6NCJ1 209 aa17.11■□□□□ 0.33
CPSF4-207ENST00000451876 MUC7Q8TAX7 377 aa17.11■□□□□ 0.33
CPSF4-207ENST00000451876 MUC4Q99102 2169 aa17.11■□□□□ 0.33
CPSF4-207ENST00000451876 TEX48A0A1B0GUV7 120 aa17.1■□□□□ 0.33
CPSF4-207ENST00000451876 DEFB130BP0DP73 79 aa17.1■□□□□ 0.33
CPSF4-207ENST00000451876 DEFB130AP0DP74 79 aa17.1■□□□□ 0.33
CPSF4-207ENST00000451876 Q6ZTI0 123 aa17.1■□□□□ 0.33
CPSF4-207ENST00000451876 RNASE3P12724 160 aaKnown RBP17.1■□□□□ 0.33
CPSF4-207ENST00000451876 GRIFINA4D1Z8 144 aa17.09■□□□□ 0.33
CPSF4-207ENST00000451876 LINC01551Q86U37 167 aa17.09■□□□□ 0.33
CPSF4-207ENST00000451876 LINC00612Q8N6U2 182 aa17.09■□□□□ 0.33
CPSF4-207ENST00000451876 MRPL16Q9NX20 251 aaKnown RBP17.09■□□□□ 0.33
CPSF4-207ENST00000451876 SPINK4O60575 86 aa17.08■□□□□ 0.32
CPSF4-207ENST00000451876 DAD1P61803 113 aa17.08■□□□□ 0.32
CPSF4-207ENST00000451876 LY96Q9Y6Y9 160 aa17.08■□□□□ 0.32
CPSF4-207ENST00000451876 GAGE12BA1L429 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 GAGE7O76087 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 SFTA3P0C7M3 94 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 GAGE12FP0CL80 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 GAGE12GP0CL81 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 GAGE12IP0CL82 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 FAM74A3Q4VXF1 159 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 SOHLH1Q5JUK2 328 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 C9orf85Q96MD7 179 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 RNASE7Q9H1E1 156 aaKnown RBP17.07■□□□□ 0.32
CPSF4-207ENST00000451876 BIN3Q9NQY0 253 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 TRGV1A0A0A0MS02 117 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 ASIPP42127 132 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 COMMD7Q86VX2 200 aa17.07■□□□□ 0.32
CPSF4-207ENST00000451876 DAZAP1Q96EP5 407 aaKnown RBP17.07■□□□□ 0.32
CPSF4-207ENST00000451876 H3BVH4 76 aa17.06■□□□□ 0.32
CPSF4-207ENST00000451876 ZFAND6Q6FIF0 208 aa17.06■□□□□ 0.32
CPSF4-207ENST00000451876 NUDT10Q8NFP7 164 aa17.06■□□□□ 0.32
CPSF4-207ENST00000451876 NUDT11Q96G61 164 aa17.06■□□□□ 0.32
CPSF4-207ENST00000451876 SPXQ9BT56 116 aa17.06■□□□□ 0.32
CPSF4-207ENST00000451876 STARD9Q9P2P6 4700 aa17.05■□□□□ 0.32
CPSF4-207ENST00000451876 LINC00862A6NCI5 91 aa17.05■□□□□ 0.32
CPSF4-207ENST00000451876 P01737 135 aa17.05■□□□□ 0.32
CPSF4-207ENST00000451876 S100A4P26447 101 aaKnown RBP17.05■□□□□ 0.32
CPSF4-207ENST00000451876 TMEM241Q24JQ0 296 aa17.05■□□□□ 0.32
CPSF4-207ENST00000451876 DNLZQ5SXM8 178 aa17.05■□□□□ 0.32
CPSF4-207ENST00000451876 LGALS9BQ3B8N2 356 aa17.04■□□□□ 0.32
CPSF4-207ENST00000451876 OR2D3Q8NGH3 330 aa17.04■□□□□ 0.32
CPSF4-207ENST00000451876 PHLDA1Q8WV24 401 aaPredicted RBP17.04■□□□□ 0.32
CPSF4-207ENST00000451876 NAT8Q9UHE5 227 aa17.04■□□□□ 0.32
CPSF4-207ENST00000451876 RPL23P62829 140 aaKnown RBP17.03■□□□□ 0.32
CPSF4-207ENST00000451876 IL36BQ9NZH7 164 aa17.03■□□□□ 0.32
CPSF4-207ENST00000451876 M0R2P5 195 aa17.03■□□□□ 0.32
CPSF4-207ENST00000451876 ARMS2P0C7Q2 107 aa17.03■□□□□ 0.32
CPSF4-207ENST00000451876 UQCC3Q6UW78 93 aa17.03■□□□□ 0.32
CPSF4-207ENST00000451876 GZMBP10144 247 aa17.02■□□□□ 0.31
CPSF4-207ENST00000451876 RASL10AQ92737 203 aa17.02■□□□□ 0.31
CPSF4-207ENST00000451876 NACAE9PAV3 2078 aa17.01■□□□□ 0.31
CPSF4-207ENST00000451876 CXCL1P09341 107 aa17.01■□□□□ 0.31
CPSF4-207ENST00000451876 TRGV2A0A075B6R0 118 aa17■□□□□ 0.31
CPSF4-207ENST00000451876 HTN3P15516 51 aa17■□□□□ 0.31
CPSF4-207ENST00000451876 ADIRFQ15847 76 aa17■□□□□ 0.31
CPSF4-207ENST00000451876 FAM231DQ6ZW35 169 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms