RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	KRTAP1-5	Q9BYS1	174 aa		6	□□□□□ -1.45
RFX3-209	ENST00000451859	MDFIC	Q9P1T7	246 aa		6	□□□□□ -1.45
RFX3-209	ENST00000451859	RBAKDN	A6NC62	111 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	ATP6V0C	P27449	155 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859		Q5BKY6	102 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	FAM159A	Q6UWV7	190 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	PQLC2	Q6ZP29	291 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	SH3BGRL3	Q9H299	93 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	MRPS16	Q9Y3D3	137 aa	Known RBP	5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	ICOS	Q9Y6W8	199 aa		5.99	□□□□□ -1.45
RFX3-209	ENST00000451859	TRGV11	A0A075B6L2	103 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	FXYD6-FXYD2	A0A087WZ82	144 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	TRGV4	A0A0C4DH28	118 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	TRBV7-9	A0A0J9YWB2	115 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	C16orf90	A8MZG2	172 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859		H3BNG1	76 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	GCHFR	P30047	84 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	TTC32	Q5I0X7	151 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859		Q6AWC8	147 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	RAB24	Q969Q5	203 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	C18orf15	Q96N68	181 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	AQP10	Q96PS8	301 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	TREM1	Q9NP99	234 aa		5.98	□□□□□ -1.45
RFX3-209	ENST00000451859	LRP1B	Q9NZR2	4599 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	GNRH2	O43555	120 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	NXPH4	O95158	308 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	CRYBA4	P53673	196 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	FHL2	Q14192	279 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	OR2G3	Q8NGZ4	309 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	PCNP	Q8WW12	178 aa	Known RBP	5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	TVP23C	Q96ET8	276 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	ZNF479	Q96JC4	524 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	PSMG3	Q9BT73	122 aa	Predicted RBP	5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	UPK3B	Q9BT76	320 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	PRO0255	Q9UI72	69 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	HHLA3	Q9XRX5	114 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	LENEP	Q9Y5L5	61 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	HSPG2	P98160	4391 aa		5.97	□□□□□ -1.45
RFX3-209	ENST00000451859	DNAH5	Q8TE73	4624 aa		5.96	□□□□□ -1.45
RFX3-209	ENST00000451859	TRAV21	A0A0B4J279	112 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	IGHV3-16	A0A0C4DH30	117 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	TYMS	P04818	313 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	GIP	P09681	153 aa	Predicted RBP	5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	STAG3L2	P0CL84	134 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	STAG3L3	P0CL85	134 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	RPL7L1	Q6DKI1	246 aa	Known RBP	5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	PRNT	Q86SH4	94 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	TMED6	Q8WW62	240 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	SPX	Q9BT56	116 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	NDFIP1	Q9BT67	221 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	SDF2L1	Q9HCN8	221 aa		5.96	□□□□□ -1.46
RFX3-209	ENST00000451859	ABCA13	Q86UQ4	5058 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	RNF222	A6NCQ9	220 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	GGTLC3	B5MD39	225 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859		C9JCJ5	164 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859		K7EQM0	130 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	SIVA1	O15304	175 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	CXorf1	O96002	111 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	GCG	P01275	180 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	MB	P02144	154 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	TCRA	P04437	139 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	GYPE	P15421	78 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	SRI	P30626	198 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	ZNF80	P51504	273 aa	Predicted RBP	5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	LINC00315	P59091	139 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	UBE2G2	P60604	165 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	SUMO1	P63165	101 aa	Known RBP	5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	MRPL23	Q16540	153 aa	Known RBP	5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	SPATA12	Q7Z6I5	190 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	TMEM75	Q8N9X5	138 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	C5orf17	Q8NAS9	161 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	OR4C5	Q8NGB2	326 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	OR2T35	Q8NGX2	323 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	ASB13	Q8WXK3	278 aa		5.95	□□□□□ -1.46
RFX3-209	ENST00000451859	APOB	P04114	4563 aa	Known RBP	5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	TRAV4	A0A0B4J268	109 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	LOC100131303	A0A0U1RQF7	123 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	SMLR1	H3BR10	107 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859		K7EQD1	137 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859		M0R2P5	195 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	FGF8	P55075	233 aa	Predicted RBP	5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	SERF2	P84101	59 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	FLI1	Q01543	452 aa	Predicted RBP	5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	SLA	Q13239	276 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	ZFP69	Q49AA0	526 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	LYPD5	Q6UWN5	251 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	NEGR1	Q7Z3B1	354 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	CYB561D1	Q8N8Q1	229 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	RASL10A	Q92737	203 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	TMEM167B	Q9NRX6	74 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	C11orf21	Q9P2W6	132 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	TNFSF18	Q9UNG2	199 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	PSG8	Q9UQ74	426 aa		5.94	□□□□□ -1.46
RFX3-209	ENST00000451859	IGHV3-73	A0A0B4J1V6	119 aa		5.93	□□□□□ -1.46
RFX3-209	ENST00000451859	TRAV34	A0A0B4J273	112 aa		5.93	□□□□□ -1.46
RFX3-209	ENST00000451859		A0A1W2PPQ1	181 aa		5.93	□□□□□ -1.46
RFX3-209	ENST00000451859	ARPC5	O15511	151 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms