RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 C18orf32Q8TCD1 76 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 C12orf57Q99622 126 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 ACANP16112 2415 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 DNAJC9-AS1A6NH13 148 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 PPP1R17O96001 155 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 SMIM6P0DI80 62 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 FOXE3Q13461 319 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 Q6ZSV7 163 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 SSBP4Q9BWG4 385 aaPredicted RBP4.93□□□□□ -1.62
USP46-202ENST00000451218 MAP1LC3CQ9BXW4 147 aa4.93□□□□□ -1.62
USP46-202ENST00000451218 K7EMT4 169 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 ARMS2P0C7Q2 107 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 CD5LO43866 347 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 CYB5R2Q6BCY4 276 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 ATP5L2Q7Z4Y8 100 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 PACRGQ96M98 296 aaPredicted RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 C1QTNF4Q9BXJ3 329 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 OR4C46A6NHA9 309 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 LGALS9O00182 355 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 SPINK4O60575 86 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 ZNF688P0C7X2 276 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 ZNF705DP0CH99 300 aaPredicted RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 ZNF705BP0CI00 300 aaPredicted RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 TRAPPC1Q9Y5R8 145 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 SELENOKQ9Y6D0 94 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 ZNF705GA8MUZ8 300 aaPredicted RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 SERF1AO75920 110 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 RBMY1A1P0DJD3 496 aaKnown RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 RBMY1CP0DJD4 496 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 MGST1P10620 155 aaKnown RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 RBMY1FQ15415 496 aaKnown RBP4.92□□□□□ -1.62
USP46-202ENST00000451218 PDZD11Q5EBL8 140 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 NAT8BQ9UHF3 227 aa4.92□□□□□ -1.62
USP46-202ENST00000451218 LINC01549A6NIU2 74 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 PSG9Q00887 426 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 PSMG4Q5JS54 123 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 MRPL54Q6P161 138 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 AMTNQ6UX39 209 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SPXQ9BT56 116 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SERTM2A0A1B0GWG4 89 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SNURFLB1AK76 121 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 H0Y8G0 127 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SNRPD3P62318 126 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 ZNF124Q15973 351 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 DNLZQ5SXM8 178 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SPATA3Q8NHX4 192 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 GSN-AS1Q9NRJ2 163 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 SMPXQ9UHP9 88 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 RPH3ALQ9UNE2 315 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 MYO9AB2RTY4 2548 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 CREBBPQ92793 2442 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 FBLL1A6NHQ2 334 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 KLLNB2CW77 178 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 LGALS1P09382 135 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 SRIP30626 198 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 CIRBPQ14011 172 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 TDRG1Q3Y452 100 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 PEF1Q9UBV8 284 aaKnown RBP4.91□□□□□ -1.62
USP46-202ENST00000451218 TLN2Q9Y4G6 2542 aa4.91□□□□□ -1.62
USP46-202ENST00000451218 RBMY1BA6NDE4 496 aaKnown RBP4.9□□□□□ -1.62
USP46-202ENST00000451218 RBMY1EA6NEQ0 496 aaKnown RBP4.9□□□□□ -1.62
USP46-202ENST00000451218 F6UB75 175 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 RBMY1DP0C7P1 496 aaKnown RBP4.9□□□□□ -1.62
USP46-202ENST00000451218 OR10J3Q5JRS4 329 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 PRR27Q6MZM9 219 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 TMEM86BQ8N661 226 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 MSRB1Q9NZV6 116 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 IGHV4-4A0A075B6R2 117 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 A0A1W2PRX2 142 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 SNAI2O43623 268 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 ZNF324O75467 553 aaPredicted RBP4.9□□□□□ -1.62
USP46-202ENST00000451218 Q6AWC8 147 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 POM121L12Q8N7R1 296 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 TMEM160Q9NX00 188 aa4.9□□□□□ -1.62
USP46-202ENST00000451218 IGLV2-18A0A075B6J9 118 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 OR5AL1P0C617 328 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 JOSD1Q15040 202 aaPredicted RBP4.9□□□□□ -1.63
USP46-202ENST00000451218 TMEM158Q8WZ71 300 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 VCX2Q9H322 139 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 C16orf95Q9H693 158 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 GATCO43716 136 aaKnown RBP4.9□□□□□ -1.63
USP46-202ENST00000451218 DEFB136Q30KP8 78 aa4.9□□□□□ -1.63
USP46-202ENST00000451218 C2orf70A6NJV1 201 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 NXPH4O95158 308 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 FABP4P15090 132 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 LINC00315P59091 139 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 PGLYRP4Q96LB8 373 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 SLC50A1Q9BRV3 221 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 DAZ1Q9NQZ3 744 aaKnown RBP4.89□□□□□ -1.63
USP46-202ENST00000451218 K7EQG2 157 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 VAMP3Q15836 100 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 TMEM101Q96IK0 257 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 PRELID3AQ96N28 172 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 RHPN1-AS1Q9BWJ2 59 aa4.89□□□□□ -1.63
USP46-202ENST00000451218 ZNF256Q9Y2P7 627 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms