RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
LSM5-208ENST00000450169 LRRC75A-AS1Q8N1F1 130 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 Q8TAT8 98 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 LINC01600Q96MT4 127 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 KLK15Q9H2R5 256 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 UBTD1Q9HAC8 227 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 FAM186AA6NE01 2351 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 OOSP1A8MZH6 123 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 IGKV3-15P01624 115 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 P0DMU3 169 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 FAM231AP0DMU4 169 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 FAM231CP0DMU5 169 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 PDE6HQ13956 83 aa6.65□□□□□ -1.35
LSM5-208ENST00000450169 DNAJC13O75165 2243 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 PATE3B3GLJ2 98 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 LHBP01229 141 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 IGKV1-17P01599 117 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 TRGV3P03979 118 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 WT1P19544 449 aaPredicted RBP6.64□□□□□ -1.35
LSM5-208ENST00000450169 RPL27AP46776 148 aaKnown RBP6.64□□□□□ -1.35
LSM5-208ENST00000450169 EMP1P54849 157 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 MRGPRG-AS1Q2M3A8 158 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 SAP25Q8TEE9 199 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 FAM240AA0A1B0GVK7 77 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 HERVK_113P63121 156 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 ADIPOQQ15848 244 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 TMEM101Q96IK0 257 aa6.64□□□□□ -1.35
LSM5-208ENST00000450169 DSCAMO60469 2012 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 A0A1B0GX51 115 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 H7C2G1 150 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 IGHV3-33P01772 117 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 CECR9P0C854 216 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 CCL4P13236 92 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 ORMDL2Q53FV1 153 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 C3orf22Q8N5N4 141 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 FAM216BQ8N7L0 139 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
LSM5-208ENST00000450169 PLXNB1O43157 2135 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 IGHV4-39P01824 125 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 ELANEP08246 267 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 HERVK_113P61574 105 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 DEFB108BQ8NET1 73 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 RNF125Q96EQ8 232 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 GAFA1Q96PS6 74 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 CCL13Q99616 98 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 PRR14LQ5THK1 2151 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 I3L2K1 104 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 TCF15Q12870 199 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 ERCC8Q13216 396 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 EBI3Q14213 229 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 ZNF491Q8N8L2 437 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
LSM5-208ENST00000450169 A4D1N5 150 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 UQCRQO14949 82 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 PMVKQ15126 192 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 Q1RN00 199 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 TMEM263Q8WUH6 116 aaKnown RBP6.61□□□□□ -1.35
LSM5-208ENST00000450169 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 ENSAO43768 121 aaKnown RBP6.61□□□□□ -1.35
LSM5-208ENST00000450169 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 Q6ZT83 130 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
LSM5-208ENST00000450169 SPRY3O43610 288 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 LPAL2Q16609 132 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
LSM5-208ENST00000450169 ZNF474Q6S9Z5 364 aaPredicted RBP6.6□□□□□ -1.35
LSM5-208ENST00000450169 C2orf66Q6UXQ4 117 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 EDA2RQ9HAV5 297 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
LSM5-208ENST00000450169 ZFHX4Q86UP3 3567 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 TEX22C9J3V5 150 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 IGHG3P01860 377 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 CCL3L1P16619 93 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 MSMPQ1L6U9 139 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 TMEM219Q86XT9 240 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 RNF7Q9UBF6 113 aa6.6□□□□□ -1.35
LSM5-208ENST00000450169 RAI1Q7Z5J4 1906 aaPredicted RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 IGHV3-72A0A0B4J1Y9 119 aa6.59□□□□□ -1.35
LSM5-208ENST00000450169 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
LSM5-208ENST00000450169 CEMP1Q6PRD7 247 aaPredicted RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 CFHR4Q92496 578 aa6.59□□□□□ -1.35
LSM5-208ENST00000450169 DUX3Q96PT4 197 aa6.59□□□□□ -1.35
LSM5-208ENST00000450169 CITED2Q99967 270 aaPredicted RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
LSM5-208ENST00000450169 BEX4Q9NWD9 120 aaPredicted RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 CACNA1HO95180 2353 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms