RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 IGKV1D-13A0A0B4J2D9 117 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 PRYO14603 147 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 IGKV1-13P0DP09 117 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 NDUFA1O15239 70 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 RICTORQ6R327 1708 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 A4D1N5 150 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 TMEM219Q86XT9 240 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.19□□□□□ -1.26
NIPBL-202ENST00000448238 IGKV1-39P01597 117 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 IGKV1D-39P04432 117 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 FAM27E3Q08E93 113 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 LINC01565O15544 149 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 FANCD2OSQ96PS1 177 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 RALGAPA2Q2PPJ7 1873 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 CFHR3Q02985 330 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 ZNF524Q96C55 264 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-202ENST00000448238 MRPS36P82909 103 aaKnown RBP7.18□□□□□ -1.26
NIPBL-202ENST00000448238 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 FGF23Q9GZV9 251 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-202ENST00000448238 WISP1O95388 367 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 LY6G6FQ5SQ64 297 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 SERTAD4-AS1Q5TG53 156 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 GFI1Q99684 422 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 ATG2AQ2TAZ0 1938 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 TICRRQ7Z2Z1 1910 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 C5orf63A6NC05 138 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 TIMM17BO60830 172 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 EFNA4P52798 201 aa7.18□□□□□ -1.26
NIPBL-202ENST00000448238 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-202ENST00000448238 LINC01465Q8N7H1 131 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 CENPVL1A0A0U1RR11 272 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 NDUFS7O75251 213 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 VWA8A3KMH1 1905 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 Q8N1Y9 231 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 NYNRINQ9P2P1 1898 aaKnown RBP7.17□□□□□ -1.26
NIPBL-202ENST00000448238 SRRM5B3KS81 715 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 H0YJW9 148 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV1-2P23083 117 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 FAM19A3Q7Z5A8 133 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 MLST8Q9BVC4 326 aa7.17□□□□□ -1.26
NIPBL-202ENST00000448238 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 PLCH1Q4KWH8 1693 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 FAM201AQ5SY85 155 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 PTH2Q96A98 100 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 PRDM6Q9NQX0 595 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 Q9HAA7 133 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 WIPF2Q8TF74 440 aaPredicted RBP7.16□□□□□ -1.26
NIPBL-202ENST00000448238 WI2-2373I1.2A0A1W2PRP0 233 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 TMEM213A2RRL7 107 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 FAM222AQ5U5X8 452 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 CELA2AP08217 269 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 CTHRC1Q96CG8 243 aa7.16□□□□□ -1.26
NIPBL-202ENST00000448238 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 PNRC2Q9NPJ4 139 aaKnown RBP7.15□□□□□ -1.26
NIPBL-202ENST00000448238 E9PLN8 166 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 GATA1P15976 413 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-202ENST00000448238 NTF4P34130 210 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 C11orf52Q96A22 123 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 PRR25Q96S07 402 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 TMEM14CQ9P0S9 112 aa7.15□□□□□ -1.26
NIPBL-202ENST00000448238 LTBP4Q8N2S1 1624 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 LYPD6BQ8NI32 183 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 PLA2G2FQ9BZM2 168 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 TNRC6CQ9HCJ0 1690 aaKnown RBP7.15□□□□□ -1.27
NIPBL-202ENST00000448238 IGLC1P0CG04 106 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 TRPM3Q9HCF6 1732 aaPredicted RBP7.15□□□□□ -1.27
NIPBL-202ENST00000448238 LECT2O14960 151 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 IGHV4-59P01825 116 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 ZFYVE26Q68DK2 2539 aa7.15□□□□□ -1.27
NIPBL-202ENST00000448238 OVOL3O00110 214 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 GATA4P43694 442 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 LILRA6Q6PI73 481 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 FRMPD3Q5JV73 1810 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 PAPPA2Q9BXP8 1791 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 IGHV3-38A0A0C4DH36 116 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.14□□□□□ -1.27
NIPBL-202ENST00000448238 CSDC2Q9Y534 153 aaKnown RBP7.14□□□□□ -1.27
NIPBL-202ENST00000448238 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 BLCAPP62952 87 aa7.14□□□□□ -1.27
NIPBL-202ENST00000448238 COX7BP24311 80 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 RNF138Q8WVD3 245 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 ZNF672Q499Z4 452 aaPredicted RBP7.13□□□□□ -1.27
NIPBL-202ENST00000448238 C1QCP02747 245 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 PLXNA3P51805 1871 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 TRBV6-6A0A0A6YYG2 114 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 NDUFA7O95182 113 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 C5orf38Q86SI9 138 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 CHCHD2Q9Y6H1 151 aaPredicted RBP7.13□□□□□ -1.27
NIPBL-202ENST00000448238 CEP192Q8TEP8 1941 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms