RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 TAGLN2P37802 199 aaKnown RBP9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 PRR27Q6MZM9 219 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 PARLQ9H300 379 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 IGKV3D-20A0A0C4DH25 116 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 M0R036 132 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 ZNF493Q6ZR52 646 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
HLA-DOB-207ENST00000447394 MUC4Q99102 2169 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 IGHV3-16A0A0C4DH30 117 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 MGST1P10620 155 aaKnown RBP9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 GNG4P50150 75 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 TCL1AP56279 114 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 TDRG1Q3Y452 100 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 Q6ZTI0 123 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 SDF2L1Q9HCN8 221 aa9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 TIMM8BQ9Y5J9 83 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOB-207ENST00000447394 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 TMEM250H0YL14 139 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GAGE7O76087 117 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 ORM1P02763 201 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 HTN3P15516 51 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 RAB14P61106 215 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 DAD1P61803 113 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 OR5I1Q13606 314 aa9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 IBA57Q5T440 356 aaKnown RBP9.42□□□□□ -0.9
HLA-DOB-207ENST00000447394 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 B4DEV8 164 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 K7EN84 100 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 CLLU1Q5K131 121 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOB-207ENST00000447394 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.9
HLA-DOB-207ENST00000447394 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
HLA-DOB-207ENST00000447394 KCNS1Q96KK3 526 aa9.4□□□□□ -0.9
HLA-DOB-207ENST00000447394 C9JCJ5 164 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 H3BVH4 76 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 SPINK4O60575 86 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 SMIM7Q9BQ49 75 aa9.39□□□□□ -0.91
HLA-DOB-207ENST00000447394 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 C3orf84H3BNL1 204 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 PEA15Q15121 130 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
HLA-DOB-207ENST00000447394 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 GZMBP10144 247 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 ASIPP42127 132 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 NDUFA5Q16718 116 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
HLA-DOB-207ENST00000447394 NUPR2A6NF83 97 aa9.36□□□□□ -0.91
HLA-DOB-207ENST00000447394 HOXA5P20719 270 aa9.36□□□□□ -0.91
HLA-DOB-207ENST00000447394 S100A1P23297 94 aa9.36□□□□□ -0.91
HLA-DOB-207ENST00000447394 SMIM12Q96EX1 92 aa9.36□□□□□ -0.91
HLA-DOB-207ENST00000447394 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 NDUFS6O75380 124 aaKnown RBP9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 NUDT10Q8NFP7 164 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 OR2D3Q8NGH3 330 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 NUDT11Q96G61 164 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 SPXQ9BT56 116 aa9.35□□□□□ -0.91
HLA-DOB-207ENST00000447394 IGLL5B9A064 214 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 F5H768 121 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 M0R2P5 195 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 P01737 135 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms