RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 TYMSP04818 313 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 ATP6V0CP27449 155 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 Q5BKY6 102 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 HSD17B11Q8NBQ5 300 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 RAB24Q969Q5 203 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
SPTLC1P1-201ENST00000447199 M0R2P5 195 aa10.79□□□□□ -0.68
SPTLC1P1-201ENST00000447199 SERTM2A0A1B0GWG4 89 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 IGLV2-11P01706 119 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 TCRAP04437 139 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 GYPEP15421 78 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 GCHFRP30047 84 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 SRIP30626 198 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 SERF2P84101 59 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 C5orf17Q8NAS9 161 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 SGK494Q96LW2 274 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 MED28Q9H204 178 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 SH3BGRL3Q9H299 93 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 C11orf21Q9P2W6 132 aa10.78□□□□□ -0.68
SPTLC1P1-201ENST00000447199 GGTLC3B5MD39 225 aa10.77□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ORM1P02763 201 aa10.77□□□□□ -0.69
SPTLC1P1-201ENST00000447199 KCNS1Q96KK3 526 aa10.77□□□□□ -0.69
SPTLC1P1-201ENST00000447199 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TNFRSF18Q9Y5U5 241 aa10.77□□□□□ -0.69
SPTLC1P1-201ENST00000447199 RNF222A6NCQ9 220 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 MBP02144 154 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 GIPP09681 153 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TNFSF18Q9UNG2 199 aa10.76□□□□□ -0.69
SPTLC1P1-201ENST00000447199 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 C9JCJ5 164 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 DNAH10OSP0CZ25 163 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 MAPKAPK5-AS1Q8N8E1 139 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TMEM167BQ9NRX6 74 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 LY96Q9Y6Y9 160 aa10.75□□□□□ -0.69
SPTLC1P1-201ENST00000447199 K7EP13 123 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 CXorf1O96002 111 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 SUMO1P63165 101 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 RPL7L1Q6DKI1 246 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 DPPA3Q6W0C5 159 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 C9orf85Q96MD7 179 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TXNDC17Q9BRA2 123 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TAAR5O14804 337 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 GCGP01275 180 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PFN1P07737 140 aaKnown RBP10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TIRAPP58753 221 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 FLI1Q01543 452 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 CYB561D1Q8N8Q1 229 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ACTR3CQ9C0K3 210 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1P1-201ENST00000447199 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 A0A1W2PRE2 83 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 G3V3Q6 166 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 K7EQM0 130 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 RS1O15537 224 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 Q8N1X5 172 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PTH2Q96A98 100 aa10.72□□□□□ -0.69
SPTLC1P1-201ENST00000447199 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 INO80EQ8NBZ0 244 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
SPTLC1P1-201ENST00000447199 A0A087WTM6 91 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 FXYD6-FXYD2A0A087WZ82 144 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 CIDEAO60543 219 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 EVI2AP22794 236 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 ZNF506Q5JVG8 444 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 FAT1Q14517 4588 aa10.7□□□□□ -0.7
SPTLC1P1-201ENST00000447199 CTXND1A0A1B0GTU2 59 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 TRBV6-4A0A1B0GX49 114 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 PGPEP1LA6NFU8 196 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 CRYGDP07320 174 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 FUSP35637 526 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 ZFP69Q49AA0 526 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 CDPF1Q6NVV7 123 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
SPTLC1P1-201ENST00000447199 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
SPTLC1P1-201ENST00000447199 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms