RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 H7C1H1 209 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 SLC25A16P16260 332 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 EFNA4P52798 201 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 FAM223BA6NKX1 122 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 LINC01619G3V211 115 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 K7EMI3 77 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 KLRB1Q12918 225 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 ORMDL2Q53FV1 153 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 C19orf54Q5BKX5 351 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 FAM223AQ8IWN6 122 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 LINC00477Q96M19 166 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 A0A1W2PPR1 153 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 C20orf78Q9BR46 151 aa14.53□□□□□ -0.08
SDCBP-204ENST00000447182 CACNA1BQ00975 2339 aa14.52□□□□□ -0.08
SDCBP-204ENST00000447182 NPFFO15130 113 aa14.52□□□□□ -0.09
SDCBP-204ENST00000447182 TOMM6Q96B49 74 aa14.52□□□□□ -0.09
SDCBP-204ENST00000447182 C20orf173Q96LM9 149 aa14.52□□□□□ -0.09
SDCBP-204ENST00000447182 MED13LQ71F56 2210 aa14.52□□□□□ -0.09
SDCBP-204ENST00000447182 MUC6Q6W4X9 2439 aa14.52□□□□□ -0.09
SDCBP-204ENST00000447182 IGLL5B9A064 214 aa14.51□□□□□ -0.09
SDCBP-204ENST00000447182 CRIP2P52943 208 aaPredicted RBP14.51□□□□□ -0.09
SDCBP-204ENST00000447182 ZFAND2AQ8N6M9 145 aa14.51□□□□□ -0.09
SDCBP-204ENST00000447182 SUMO2P61956 95 aaKnown RBP14.51□□□□□ -0.09
SDCBP-204ENST00000447182 LMO4P61968 165 aa14.51□□□□□ -0.09
SDCBP-204ENST00000447182 TRAV41A0A0B4J266 112 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 FOXI2Q6ZQN5 318 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 RASL10AQ92737 203 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 TRAV21A0A0B4J279 112 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 IGF1P05019 195 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 C12orf74Q32Q52 190 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 DPH3P1Q9H4G8 78 aa14.5□□□□□ -0.09
SDCBP-204ENST00000447182 OVOL1O14753 267 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 MED14OSP0DP75 135 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 GPHB5Q86YW7 130 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 NEXN-AS1Q8NBZ9 246 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 SCGB3A1Q96QR1 104 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 MOB4Q9Y3A3 225 aa14.49□□□□□ -0.09
SDCBP-204ENST00000447182 CHTOPQ9Y3Y2 248 aaKnown RBP14.49□□□□□ -0.09
SDCBP-204ENST00000447182 TRBV7-3A0A075B6L6 115 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 M0R381 172 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 AGRNO00468 2067 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 A0A1B0GWB2 263 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 F8W1H4 67 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 SOCS3O14543 225 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 OR10J6PQ8NGY7 276 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 ZNF479Q96JC4 524 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 HIST1H4GQ99525 98 aa14.48□□□□□ -0.09
SDCBP-204ENST00000447182 TEX48A0A1B0GUV7 120 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 ARL3P36405 182 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 MYMXA0A1B0GTQ4 84 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 OR11H12B2RN74 326 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 NDUFA4O00483 81 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 ASIPP42127 132 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 RPL24P83731 157 aaKnown RBP14.47□□□□□ -0.09
SDCBP-204ENST00000447182 OR11H1Q8NG94 326 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 OR11H2Q8NH07 326 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 FAM19A4Q96LR4 140 aa14.47□□□□□ -0.09
SDCBP-204ENST00000447182 RNF223E7ERA6 249 aa14.46□□□□□ -0.09
SDCBP-204ENST00000447182 UCNP55089 124 aa14.46□□□□□ -0.09
SDCBP-204ENST00000447182 BPESC1Q9GZL8 116 aa14.46□□□□□ -0.09
SDCBP-204ENST00000447182 NBASA2RRP1 2371 aa14.46□□□□□ -0.09
SDCBP-204ENST00000447182 S100A4P26447 101 aaKnown RBP14.45□□□□□ -0.1
SDCBP-204ENST00000447182 APRG1Q8IVJ8 170 aa14.45□□□□□ -0.1
SDCBP-204ENST00000447182 PHLDA3Q9Y5J5 127 aa14.45□□□□□ -0.1
SDCBP-204ENST00000447182 SVEP1Q4LDE5 3571 aa14.45□□□□□ -0.1
SDCBP-204ENST00000447182 UNQ9165/PRO28630Q6UXU0 137 aa14.45□□□□□ -0.1
SDCBP-204ENST00000447182 TMEM219Q86XT9 240 aa14.45□□□□□ -0.1
SDCBP-204ENST00000447182 RPL39LQ96EH5 51 aaKnown RBP14.45□□□□□ -0.1
SDCBP-204ENST00000447182 TRBV7-9A0A0J9YWB2 115 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 TMEM238C9JI98 176 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 PPP1R17O96001 155 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 C14orf178Q8N769 122 aaPredicted RBP14.44□□□□□ -0.1
SDCBP-204ENST00000447182 BAALCQ8WXS3 180 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 SPOCK3Q9BQ16 436 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 J3KRW8 73 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 RRN3P1Q2M238 152 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 ANXA2RQ3ZCQ2 193 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 C2orf66Q6UXQ4 117 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 KLK15Q9H2R5 256 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 UBTD1Q9HAC8 227 aa14.44□□□□□ -0.1
SDCBP-204ENST00000447182 BRI3O95415 125 aa14.43□□□□□ -0.1
SDCBP-204ENST00000447182 SPANXB1Q9NS25 103 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-204ENST00000447182 LINC00527Q9UJ94 153 aa14.42□□□□□ -0.1
SDCBP-204ENST00000447182 RAXQ9Y2V3 346 aa14.42□□□□□ -0.1
SDCBP-204ENST00000447182 TRBV12-3P01733 135 aa14.41□□□□□ -0.1
SDCBP-204ENST00000447182 LGALS1P09382 135 aaKnown RBP14.41□□□□□ -0.1
SDCBP-204ENST00000447182 ASH1LQ9NR48 2969 aaKnown RBP14.41□□□□□ -0.1
SDCBP-204ENST00000447182 SPRY2O43597 315 aa14.41□□□□□ -0.1
SDCBP-204ENST00000447182 NXPH4O95158 308 aa14.41□□□□□ -0.1
SDCBP-204ENST00000447182 RNASE3P12724 160 aaKnown RBP14.41□□□□□ -0.1
SDCBP-204ENST00000447182 WFDC2Q14508 124 aa14.41□□□□□ -0.1
SDCBP-204ENST00000447182 PRSS29PA6NIE9 313 aa14.4□□□□□ -0.1
SDCBP-204ENST00000447182 H3BUA1 57 aa14.4□□□□□ -0.1
SDCBP-204ENST00000447182 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
SDCBP-204ENST00000447182 USMG5Q96IX5 58 aa14.4□□□□□ -0.1
SDCBP-204ENST00000447182 H3BMG7 143 aa14.39□□□□□ -0.11
SDCBP-204ENST00000447182 MGPP08493 103 aa14.39□□□□□ -0.11
SDCBP-204ENST00000447182 RNASE4P34096 147 aaKnown RBP14.39□□□□□ -0.11
SDCBP-204ENST00000447182 SPTBN1Q01082 2364 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms