RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 RPL35P42766 123 aaKnown RBP12.96□□□□□ -0.33
PHTF1-207ENST00000446739 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
PHTF1-207ENST00000446739 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
PHTF1-207ENST00000446739 MUC4Q99102 2169 aa12.96□□□□□ -0.34
PHTF1-207ENST00000446739 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
PHTF1-207ENST00000446739 DEFB130BP0DP73 79 aa12.95□□□□□ -0.34
PHTF1-207ENST00000446739 DEFB130AP0DP74 79 aa12.95□□□□□ -0.34
PHTF1-207ENST00000446739 LINC00612Q8N6U2 182 aa12.95□□□□□ -0.34
PHTF1-207ENST00000446739 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
PHTF1-207ENST00000446739 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
PHTF1-207ENST00000446739 DERL1Q9BUN8 251 aa12.94□□□□□ -0.34
PHTF1-207ENST00000446739 MED9Q9NWA0 146 aa12.94□□□□□ -0.34
PHTF1-207ENST00000446739 MDFICQ9P1T7 246 aa12.94□□□□□ -0.34
PHTF1-207ENST00000446739 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
PHTF1-207ENST00000446739 GNRH2O43555 120 aa12.93□□□□□ -0.34
PHTF1-207ENST00000446739 TYMSP04818 313 aa12.93□□□□□ -0.34
PHTF1-207ENST00000446739 CRIP1P50238 77 aa12.93□□□□□ -0.34
PHTF1-207ENST00000446739 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
PHTF1-207ENST00000446739 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
PHTF1-207ENST00000446739 IGHV3-16A0A0C4DH30 117 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 SPINK4O60575 86 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 SH2D1AO60880 128 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 ZNF674Q2M3X9 581 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 TOR2AQ5JU69 321 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 NHLRC2Q8NBF2 726 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 SPXQ9BT56 116 aa12.92□□□□□ -0.34
PHTF1-207ENST00000446739 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 GAGE12BA1L429 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
PHTF1-207ENST00000446739 GAGE7O76087 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 ATP5G1P05496 136 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 GAGE12FP0CL80 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 GAGE12GP0CL81 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 GAGE12IP0CL82 117 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 CENPWQ5EE01 88 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 Q6ZTI0 123 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
PHTF1-207ENST00000446739 EIF5A2Q9GZV4 153 aaKnown RBP12.91□□□□□ -0.34
PHTF1-207ENST00000446739 ORM1P02763 201 aa12.9□□□□□ -0.34
PHTF1-207ENST00000446739 HTN3P15516 51 aa12.9□□□□□ -0.34
PHTF1-207ENST00000446739 GNG4P50150 75 aa12.9□□□□□ -0.34
PHTF1-207ENST00000446739 TCTAP57738 103 aa12.9□□□□□ -0.34
PHTF1-207ENST00000446739 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
PHTF1-207ENST00000446739 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
PHTF1-207ENST00000446739 B4DEV8 164 aa12.89□□□□□ -0.35
PHTF1-207ENST00000446739 IGLL5B9A064 214 aa12.89□□□□□ -0.35
PHTF1-207ENST00000446739 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
PHTF1-207ENST00000446739 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
PHTF1-207ENST00000446739 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
PHTF1-207ENST00000446739 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
PHTF1-207ENST00000446739 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
PHTF1-207ENST00000446739 LINC01559Q495D7 138 aa12.88□□□□□ -0.35
PHTF1-207ENST00000446739 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
PHTF1-207ENST00000446739 IGHV4-4A0A075B6R2 117 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 KRBOX1C9JBD0 128 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 M0R036 132 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 M0R2P5 195 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 S100A4P26447 101 aaKnown RBP12.87□□□□□ -0.35
PHTF1-207ENST00000446739 ASIPP42127 132 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 RASL10AQ92737 203 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 PARLQ9H300 379 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
PHTF1-207ENST00000446739 TRBV20OR9-2A0A075B6H5 130 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 C9JCJ5 164 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 F5H768 121 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 IGLV2-8P01709 118 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
PHTF1-207ENST00000446739 RAB14P61106 215 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 DNLZQ5SXM8 178 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 PRR27Q6MZM9 219 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 BIN3Q9NQY0 253 aa12.86□□□□□ -0.35
PHTF1-207ENST00000446739 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
PHTF1-207ENST00000446739 NDUFAF3Q9BU61 184 aa12.85□□□□□ -0.35
PHTF1-207ENST00000446739 OR5I1Q13606 314 aa12.84□□□□□ -0.35
PHTF1-207ENST00000446739 IL36BQ9NZH7 164 aa12.84□□□□□ -0.35
PHTF1-207ENST00000446739 APLNQ9ULZ1 77 aa12.84□□□□□ -0.35
PHTF1-207ENST00000446739 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.36
PHTF1-207ENST00000446739 CXCL1P09341 107 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 CEBPGP53567 150 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 PEA15Q15121 130 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 PTH2Q96A98 100 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
PHTF1-207ENST00000446739 LYSTQ99698 3801 aa12.83□□□□□ -0.36
PHTF1-207ENST00000446739 TMSB15BA0A087X1C1 80 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 ZNF876PQ49A33 203 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 SMDT1Q9H4I9 107 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
PHTF1-207ENST00000446739 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
PHTF1-207ENST00000446739 H3BVH4 76 aa12.81□□□□□ -0.36
PHTF1-207ENST00000446739 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
PHTF1-207ENST00000446739 HOXA5P20719 270 aa12.81□□□□□ -0.36
PHTF1-207ENST00000446739 IFITM2Q01629 132 aa12.81□□□□□ -0.36
PHTF1-207ENST00000446739 ZNF575Q86XF7 245 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms