RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 COX11Q9Y6N1 276 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-204ENST00000446349 ZC2HC1BQ5TFG8 222 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SIGLEC8Q9NYZ4 499 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 CXCL5P42830 114 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BLQ99880 126 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 MRPL36Q9P0J6 103 aaKnown RBP6.72□□□□□ -1.33
PTPN3-204ENST00000446349 ZNRD1Q9P1U0 126 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 IGLV11-55A0A075B6I3 123 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 C16orf54Q6UWD8 224 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 CTSZQ9UBR2 303 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 PCDH15Q96QU1 1955 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SMIM9A6NGZ8 99 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SNAI2O43623 268 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 GUSBP1Q15486 140 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 DSCR8Q96T75 97 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 U3KQE9 123 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 NOP10Q9NPE3 64 aaKnown RBP6.71□□□□□ -1.33
PTPN3-204ENST00000446349 IGHV7-81A0A0B4J1V7 117 aa6.71□□□□□ -1.33
PTPN3-204ENST00000446349 RSPO1Q2MKA7 263 aaPredicted RBP6.71□□□□□ -1.33
PTPN3-204ENST00000446349 FXYD5Q96DB9 178 aa6.71□□□□□ -1.33
PTPN3-204ENST00000446349 CFHR3Q02985 330 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 TAL2Q16559 108 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 F8VRH5 84 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 Q6ZVH6 145 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 ZNF503-AS2A6NEH8 195 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-204ENST00000446349 C11orf53Q8IXP5 236 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 CRYGCP07315 174 aa6.71□□□□□ -1.34
PTPN3-204ENST00000446349 ANKHD1Q8IWZ3 2542 aaKnown RBP6.7□□□□□ -1.34
PTPN3-204ENST00000446349 HIST3H2BBQ8N257 126 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 PRSS47A8MTI9 375 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 UTF1Q5T230 341 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 LURAP1LQ8IV03 231 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 MLANAQ16655 118 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 BVES-AS1Q5T3Y7 98 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 ATP6V0E2Q8NHE4 81 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 MEGF9Q9H1U4 602 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 PRO3102Q9H379 93 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 K7EQD1 137 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
PTPN3-204ENST00000446349 C2orf70A6NJV1 201 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 IGHV4-38-2P0DP08 117 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 MRAPQ8TCY5 172 aa6.7□□□□□ -1.34
PTPN3-204ENST00000446349 LTAP01374 205 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 Q8N9W7 124 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 CCL25O15444 150 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 HCFC1P51610 2035 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 PRR20EP86478 221 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 PRR20CP86479 221 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 PRR20DP86480 221 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 PRR20BP86481 221 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 PRR20AP86496 221 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 TTC28Q96AY4 2481 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 TRAV12-2A0A075B6T6 113 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 BUB3O43684 328 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 LINC00205P59089 165 aa6.69□□□□□ -1.34
PTPN3-204ENST00000446349 ODF3Q96PU9 254 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 C9JQL5 133 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
PTPN3-204ENST00000446349 CXCL1P09341 107 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 IFITM1P13164 125 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 DUX4L9Q6RFH8 374 aaPredicted RBP6.68□□□□□ -1.34
PTPN3-204ENST00000446349 ZFHX2Q9C0A1 2572 aaPredicted RBP6.68□□□□□ -1.34
PTPN3-204ENST00000446349 COLCA2A8K830 154 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 COX7A2LO14548 114 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 PRB1P04280 392 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 GAGE2BQ13066 116 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 FNDC4Q9H6D8 234 aaPredicted RBP6.68□□□□□ -1.34
PTPN3-204ENST00000446349 TPSG1Q9NRR2 321 aa6.68□□□□□ -1.34
PTPN3-204ENST00000446349 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 GSN-AS1Q9NRJ2 163 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 I3L2K1 104 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SLURP1P55000 103 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
PTPN3-204ENST00000446349 KIAA1549Q9HCM3 1950 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 ZFP2Q6ZN57 461 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 RNF144BQ7Z419 303 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms