RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NTN3O00634 580 aaPredicted RBP6.24□□□□□ -1.41
SMG1-202ENST00000446231 DUX3Q96PT4 197 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 ZSWIM8A7E2V4 1837 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 SPATA25Q9BR10 227 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 IGHV1-3A0A0C4DH29 117 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 RASL10AQ92737 203 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 PAX4O43316 350 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 C5orf47Q569G3 176 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 NLRC5Q86WI3 1866 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 RPL32P62910 135 aaKnown RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 TRBV10-2A0A0K0K1G8 114 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 ACYP1P07311 99 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 RBMY1BA6NDE4 496 aaKnown RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 RBMY1EA6NEQ0 496 aaKnown RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 RBMY1DP0C7P1 496 aaKnown RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 RBMY1A1P0DJD3 496 aaKnown RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 RBMY1CP0DJD4 496 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 CHCHD5Q9BSY4 110 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 ADARB2-AS1A8MUL3 147 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 SOCS3O14543 225 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 H3BRN7 92 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 ZFP2Q6ZN57 461 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 TCL1BO95988 128 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
SMG1-202ENST00000446231 NDUFA11Q86Y39 141 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 PAX8Q06710 450 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 IGHV1-18A0A0C4DH31 117 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 A0A1B0GX51 115 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 TMEM178BH3BS89 294 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
SMG1-202ENST00000446231 TRGV11A0A075B6L2 103 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
SMG1-202ENST00000446231 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 RHOHQ15669 191 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 TRAV12-1A0A0B4J245 112 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 KLHL30-AS1Q8NEE0 82 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 MAFAQ8NHW3 353 aaPredicted RBP6.22□□□□□ -1.41
SMG1-202ENST00000446231 CRPP02741 224 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 C1orf210Q8IVY1 113 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 ZNF831Q5JPB2 1677 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 ZNF415Q09FC8 603 aa6.22□□□□□ -1.41
SMG1-202ENST00000446231 ZNF876PQ49A33 203 aa6.21□□□□□ -1.41
SMG1-202ENST00000446231 IGKV1-17P01599 117 aa6.21□□□□□ -1.41
SMG1-202ENST00000446231 Q6ZS92 163 aa6.21□□□□□ -1.41
SMG1-202ENST00000446231 BUB1B-PAK6H3BSN5 160 aa6.21□□□□□ -1.41
SMG1-202ENST00000446231 MAPKAPK5-AS1Q8N8E1 139 aa6.21□□□□□ -1.41
SMG1-202ENST00000446231 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 Q6ZPA2 131 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 A4D1N5 150 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 HERVK_113P63121 156 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 TMEM86BQ8N661 226 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 C17orf77Q96MU5 243 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 ATOX1O00244 68 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 TOMM7Q9P0U1 55 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 PATE3B3GLJ2 98 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 XGP55808 180 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
SMG1-202ENST00000446231 BRWD1-AS2P59051 145 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 TMEM258P61165 79 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
SMG1-202ENST00000446231 INSL3P51460 131 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 FAM27E3Q08E93 113 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 RBM3P98179 157 aaKnown RBP6.2□□□□□ -1.42
SMG1-202ENST00000446231 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 C2orf16Q68DN1 1984 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 LGALS9O00182 355 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 LTBRP36941 435 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 IGKV3D-7A0A0C4DH55 119 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 ZNF71Q9NQZ8 489 aaPredicted RBP6.2□□□□□ -1.42
SMG1-202ENST00000446231 ATP5G1P05496 136 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 MRAPQ8TCY5 172 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 TMEM243Q9BU79 118 aa6.2□□□□□ -1.42
SMG1-202ENST00000446231 TOMM6Q96B49 74 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 IGKV2D-26A0A0A0MRZ7 120 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 AGPAT4-IT1Q9H0P7 198 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 TRAV41A0A0B4J266 112 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 ZNF503-AS2A6NEH8 195 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 LINC01560Q8TB33 94 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 LINC00311Q8N616 119 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
SMG1-202ENST00000446231 COL4A3Q01955 1670 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 SP5Q6BEB4 398 aaPredicted RBP6.18□□□□□ -1.42
SMG1-202ENST00000446231 DKK1O94907 266 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 IGHV3OR16-10A0A075B7F0 116 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 I3L3M4 83 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 IGHV3-11P01762 117 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms