RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 OR5I1Q13606 314 aa12.43□□□□□ -0.42
LIME1-202ENST00000444951 UQCC3Q6UW78 93 aa12.43□□□□□ -0.42
LIME1-202ENST00000444951 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
LIME1-202ENST00000444951 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 CBY3A6NI87 242 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 M0R036 132 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 ORM1P02763 201 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 AZU1P20160 251 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 EMP1P54849 157 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
LIME1-202ENST00000444951 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
LIME1-202ENST00000444951 IGHV4-28A0A0C4DH34 117 aa12.41□□□□□ -0.42
LIME1-202ENST00000444951 K7EN84 100 aa12.41□□□□□ -0.42
LIME1-202ENST00000444951 COX8CQ7Z4L0 72 aa12.41□□□□□ -0.42
LIME1-202ENST00000444951 EIF4E3Q8N5X7 224 aaKnown RBP12.41□□□□□ -0.42
LIME1-202ENST00000444951 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
LIME1-202ENST00000444951 ADIRFQ15847 76 aa12.4□□□□□ -0.42
LIME1-202ENST00000444951 SMIM12Q96EX1 92 aa12.4□□□□□ -0.42
LIME1-202ENST00000444951 NAT8Q9UHE5 227 aa12.4□□□□□ -0.42
LIME1-202ENST00000444951 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 GNRH2O43555 120 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 MIFP14174 115 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 SLC7A5P1Q8MH63 180 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 NEU1Q99519 415 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 SDF2L1Q9HCN8 221 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
LIME1-202ENST00000444951 B4DEV8 164 aa12.38□□□□□ -0.43
LIME1-202ENST00000444951 F8W036 122 aa12.38□□□□□ -0.43
LIME1-202ENST00000444951 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
LIME1-202ENST00000444951 Q8NAQ8 132 aa12.38□□□□□ -0.43
LIME1-202ENST00000444951 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
LIME1-202ENST00000444951 TIMM8BQ9Y5J9 83 aaPredicted RBP12.38□□□□□ -0.43
LIME1-202ENST00000444951 LY96Q9Y6Y9 160 aa12.38□□□□□ -0.43
LIME1-202ENST00000444951 IGKV3D-20A0A0C4DH25 116 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 TYMSP04818 313 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 RPL23P62829 140 aaKnown RBP12.37□□□□□ -0.43
LIME1-202ENST00000444951 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 LINC00467Q9BRT7 94 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 GSN-AS1Q9NRJ2 163 aa12.37□□□□□ -0.43
LIME1-202ENST00000444951 TRGV11A0A075B6L2 103 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 P01737 135 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 ADCYAP1P18509 176 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 TMEM263Q8WUH6 116 aaKnown RBP12.36□□□□□ -0.43
LIME1-202ENST00000444951 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
LIME1-202ENST00000444951 C19orf71A6NCJ1 209 aa12.35□□□□□ -0.43
LIME1-202ENST00000444951 ERVFC1-1P60608 527 aa12.35□□□□□ -0.43
LIME1-202ENST00000444951 TDRG1Q3Y452 100 aa12.35□□□□□ -0.43
LIME1-202ENST00000444951 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
LIME1-202ENST00000444951 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
LIME1-202ENST00000444951 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
LIME1-202ENST00000444951 SNURFLB1AK76 121 aa12.34□□□□□ -0.43
LIME1-202ENST00000444951 GZMBP10144 247 aa12.34□□□□□ -0.43
LIME1-202ENST00000444951 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
LIME1-202ENST00000444951 ZNF415Q09FC8 603 aa12.34□□□□□ -0.43
LIME1-202ENST00000444951 IBA57Q5T440 356 aaKnown RBP12.34□□□□□ -0.43
LIME1-202ENST00000444951 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
LIME1-202ENST00000444951 ISOC2Q96AB3 205 aa12.34□□□□□ -0.43
LIME1-202ENST00000444951 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
LIME1-202ENST00000444951 GATCO43716 136 aaKnown RBP12.33□□□□□ -0.44
LIME1-202ENST00000444951 ASIPP42127 132 aa12.33□□□□□ -0.44
LIME1-202ENST00000444951 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
LIME1-202ENST00000444951 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
LIME1-202ENST00000444951 KMT2AQ03164 3969 aa12.32□□□□□ -0.44
LIME1-202ENST00000444951 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
LIME1-202ENST00000444951 H3BVH4 76 aa12.32□□□□□ -0.44
LIME1-202ENST00000444951 C11orf72Q8NBR9 251 aa12.32□□□□□ -0.44
LIME1-202ENST00000444951 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
LIME1-202ENST00000444951 FRAS1Q86XX4 4008 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 NDUFA5Q16718 116 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 FAM222AQ5U5X8 452 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 SFRP2Q96HF1 295 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 C11orf68Q9H3H3 251 aaKnown RBP12.31□□□□□ -0.44
LIME1-202ENST00000444951 CELA1Q9UNI1 258 aa12.31□□□□□ -0.44
LIME1-202ENST00000444951 TCL1AP56279 114 aa12.3□□□□□ -0.44
LIME1-202ENST00000444951 FAM231DQ6ZW35 169 aa12.3□□□□□ -0.44
LIME1-202ENST00000444951 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
LIME1-202ENST00000444951 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
LIME1-202ENST00000444951 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
LIME1-202ENST00000444951 RNASE3P12724 160 aaKnown RBP12.29□□□□□ -0.44
LIME1-202ENST00000444951 RPS20P60866 119 aaKnown RBP12.29□□□□□ -0.44
LIME1-202ENST00000444951 SSTP61278 116 aa12.29□□□□□ -0.44
LIME1-202ENST00000444951 ZNF575Q86XF7 245 aa12.29□□□□□ -0.44
LIME1-202ENST00000444951 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms