RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SCRT2Q9NQ03 307 aa8.31□□□□□ -1.08
TOP3B-210ENST00000444502 CFAP46Q8IYW2 2715 aa8.31□□□□□ -1.08
TOP3B-210ENST00000444502 TRBV7-9A0A0J9YWB2 115 aa8.31□□□□□ -1.08
TOP3B-210ENST00000444502 FAM110DQ8TAY7 271 aaPredicted RBP8.31□□□□□ -1.08
TOP3B-210ENST00000444502 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
TOP3B-210ENST00000444502 SHANK2-AS3Q9BTD1 123 aa8.31□□□□□ -1.08
TOP3B-210ENST00000444502 OR11H1Q8NG94 326 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 OR11H6Q8NGC7 330 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 FABP5P3A8MUU1 101 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 DAZ1Q9NQZ3 744 aaKnown RBP8.3□□□□□ -1.08
TOP3B-210ENST00000444502 ASIPP42127 132 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 LMO4P61968 165 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 Q86TA4 180 aa8.3□□□□□ -1.08
TOP3B-210ENST00000444502 TRGV2A0A075B6R0 118 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 J3QLI3 93 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 SNCGO76070 127 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 IGKV1-17P01599 117 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 PCP2Q8IVA1 136 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 BBC3Q96PG8 261 aaPredicted RBP8.29□□□□□ -1.08
TOP3B-210ENST00000444502 LINC00574Q9H8X3 128 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 ARMS2P0C7Q2 107 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 INSL3P51460 131 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 DEFB121Q5J5C9 76 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 ZNF491Q8N8L2 437 aa8.29□□□□□ -1.08
TOP3B-210ENST00000444502 MT-ATP8P03928 68 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 DEFB131AP59861 70 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 LYZL1Q6UWQ5 148 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 VPREB3Q9UKI3 123 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 TNRC18O15417 2968 aaPredicted RBP8.28□□□□□ -1.08
TOP3B-210ENST00000444502 IGKV1D-37A0A075B6S9 117 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 H7C2G1 150 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 NCR2O95944 276 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 ERCC8Q13216 396 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 IGHV7-81A0A0B4J1V7 117 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 FAM223BA6NKX1 122 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 FAM223AQ8IWN6 122 aa8.28□□□□□ -1.08
TOP3B-210ENST00000444502 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 K7EIM0 57 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 HLA-DMBP28068 263 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 SRSF9Q13242 221 aaKnown RBP eCLIP8.27□□□□□ -1.09
TOP3B-210ENST00000444502 TRAV8-2A0A0B4J237 113 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 SCGB1D4Q6XE38 83 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 OR9G4Q8NGQ1 327 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
TOP3B-210ENST00000444502 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 TMEM160Q9NX00 188 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.09
TOP3B-210ENST00000444502 DSCAML1Q8TD84 2053 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 GTSCR1Q86UQ5 136 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 MYOZ3Q8TDC0 251 aa8.27□□□□□ -1.09
TOP3B-210ENST00000444502 ZNF256Q9Y2P7 627 aaPredicted RBP8.27□□□□□ -1.09
TOP3B-210ENST00000444502 I3L2K1 104 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 FXYD2P54710 66 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 SH2D1AO60880 128 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 MAP1LC3AQ9H492 121 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 A0A1W2PPR1 153 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 KRTAP10-9P60411 292 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
TOP3B-210ENST00000444502 EVI2AP22794 236 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 ZNF502Q8TBZ5 544 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 IGHV3-73A0A0B4J1V6 119 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 TMEM213A2RRL7 107 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 F8W1H4 67 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 Q1RN00 199 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 AMN1Q8IY45 258 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 TTC9CQ8N5M4 171 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 Q8N9W7 124 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 TET2Q6N021 2002 aaPredicted RBP8.25□□□□□ -1.09
TOP3B-210ENST00000444502 D6R8Y8 96 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 H3BRN7 92 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 GP9P14770 177 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 TRAV21A0A0B4J279 112 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 FOXE3Q13461 319 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 DYNAPQ8N1N2 210 aa8.25□□□□□ -1.09
TOP3B-210ENST00000444502 USP24Q9UPU5 2620 aa8.24□□□□□ -1.09
TOP3B-210ENST00000444502 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
TOP3B-210ENST00000444502 SIRPDQ9H106 197 aa8.24□□□□□ -1.09
TOP3B-210ENST00000444502 XCL2Q9UBD3 114 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms