RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ARMS2P0C7Q2 107 aa10.92□□□□□ -0.66
SMARCA4-204ENST00000444061 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-204ENST00000444061 C9JQL5 133 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 F6UB75 175 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 EREGO14944 169 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 GGTLC3B5MD39 225 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 BUB3O43684 328 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 CD300EQ496F6 205 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 PRR25Q96S07 402 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 TRBV12-3P01733 135 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 Q0VG73 95 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 TMEM256Q8N2U0 113 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 TMEM160Q9NX00 188 aa10.91□□□□□ -0.66
SMARCA4-204ENST00000444061 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 HBDP02042 147 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 LINC01006Q8NI28 216 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 DPH3P1Q9H4G8 78 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 PLXNB1O43157 2135 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 CRLF1O75462 422 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 CRPP02741 224 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 HLA-DMBP28068 263 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 ZNF726P1Q15940 193 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 ACANP16112 2415 aa10.9□□□□□ -0.66
SMARCA4-204ENST00000444061 TYMSP04818 313 aa10.9□□□□□ -0.67
SMARCA4-204ENST00000444061 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 SCGB3A1Q96QR1 104 aa10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 CFHR3Q02985 330 aa10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 MRPL53Q96EL3 112 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 SNHG12Q9BXW3 62 aa10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 SNAI2O43623 268 aa10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-204ENST00000444061 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 GAGE7O76087 117 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 MRPL36Q9P0J6 103 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 RHODO00212 210 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 C3orf79P0CE67 100 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 ZNF48Q96MX3 618 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 VGLL1Q99990 258 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 PIFOQ8TCI5 191 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 P0C879 139 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 UNQ9165/PRO28630Q6UXU0 137 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 ZNF702PQ9H963 129 aa10.88□□□□□ -0.67
SMARCA4-204ENST00000444061 A0A087WWL8 130 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 BRCA2P51587 3418 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 MORN3Q6PF18 240 aaPredicted RBP10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 H7C2G1 150 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 CRYGBP07316 175 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 EVI2AP22794 236 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 AZU1P20160 251 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 AGPAT4-IT1Q9H0P7 198 aa10.87□□□□□ -0.67
SMARCA4-204ENST00000444061 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 DPM2O94777 84 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 PATE2Q6UY27 113 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 Q8N6K4 173 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 PRSS2P07478 247 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 ZNF492Q9P255 531 aa10.86□□□□□ -0.67
SMARCA4-204ENST00000444061 CSTL1Q9H114 145 aa10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 C10orf99Q6UWK7 81 aa10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 LENEPQ9Y5L5 61 aa10.85□□□□□ -0.67
SMARCA4-204ENST00000444061 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 ESDP10768 282 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 IGKV1OR2-108A0A075B7D4 117 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 A8MWV9 139 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 SPXQ9BT56 116 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms