RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ODF3Q96PU9 254 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 AP5S1Q9NUS5 200 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 U3KQK5 164 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 TRAV21A0A0B4J279 112 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 PRAC2D3DTV9 90 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 ORM1P02763 201 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF80P51504 273 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-209ENST00000440653 SCGB2A2Q13296 93 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 Q8N2B8 174 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 RHPN1-AS1Q9BWJ2 59 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 AGPAT4-IT1Q9H0P7 198 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 KLK15Q9H2R5 256 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF702PQ9H963 129 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 RYR1P21817 5038 aa6.93□□□□□ -1.3
HDAC6-209ENST00000440653 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
HDAC6-209ENST00000440653 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 TMSB15BA0A087X1C1 80 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV3-49A0A0A0MS15 119 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 M0QZ24 198 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 CRXO43186 299 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-209ENST00000440653 SNAI2O43623 268 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 LINC00614P0C842 121 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 C3orf79P0CE67 100 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 ERCC8Q13216 396 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 IGFL4Q6B9Z1 124 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 KLHDC1Q8N7A1 406 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 UBE2E2Q96LR5 201 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 LEPROTL1O95214 131 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 TWIST1Q15672 202 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 TMEM95Q3KNT9 176 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 OR8A1Q8NGG7 326 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 FAM19A4Q96LR4 140 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 PRELID3AQ96N28 172 aa6.91□□□□□ -1.3
HDAC6-209ENST00000440653 TRAV2A0A0B4J234 112 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 TMEM213A2RRL7 107 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 D6R8Y8 96 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-209ENST00000440653 SNRPD3P62318 126 aaKnown RBP6.9□□□□□ -1.3
HDAC6-209ENST00000440653 MRPL51Q4U2R6 128 aaKnown RBP6.9□□□□□ -1.3
HDAC6-209ENST00000440653 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 Q6ZS46 218 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 Q8N976 141 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 WFDC12Q8WWY7 111 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 URB1-AS1Q96HZ7 61 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 C20orf173Q96LM9 149 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 MAP1LC3CQ9BXW4 147 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.3
HDAC6-209ENST00000440653 NXT2Q9NPJ8 142 aaKnown RBP6.9□□□□□ -1.3
HDAC6-209ENST00000440653 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 CKS2P33552 79 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 LEPP41159 167 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 ASIPP42127 132 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 RPL11P62913 178 aaKnown RBP6.89□□□□□ -1.31
HDAC6-209ENST00000440653 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 AMN1Q8IY45 258 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 ZFAND2AQ8N6M9 145 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 RNF114Q9Y508 228 aa6.89□□□□□ -1.31
HDAC6-209ENST00000440653 KLLNB2CW77 178 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 HBDP02042 147 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 RPLP1P05386 114 aaKnown RBP6.88□□□□□ -1.31
HDAC6-209ENST00000440653 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 DEFB125Q8N687 156 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 C4orf3Q8WVX3 66 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
HDAC6-209ENST00000440653 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 DUSP14O95147 198 aaKnown RBP6.87□□□□□ -1.31
HDAC6-209ENST00000440653 NXPH4O95158 308 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 PRB2P02812 416 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-209ENST00000440653 TSPOP30536 169 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-209ENST00000440653 HILS1P60008 231 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 SPANXN1Q5VSR9 72 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 EBLN2Q6P2I7 272 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms