RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 LOC102724200A0A096LPH7 203 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-204ENST00000440431 TRBV7-9A0A0J9YWB2 115 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 ARMS2P0C7Q2 107 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 GP9P14770 177 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 UTF1Q5T230 341 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 Q6YL49 198 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 C11orf52Q96A22 123 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 YPEL4Q96NS1 127 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 PRR25Q96S07 402 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 VSIRQ9H7M9 311 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 ODF3BA8MYP8 253 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 PSCAO43653 123 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 DPM2O94777 84 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 DNAL4O96015 105 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 LINC00205P59089 165 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 IL15RAQ13261 267 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 MLANAQ16655 118 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 RNF182Q8N6D2 247 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 MS4A6AQ9H2W1 248 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM160Q9NX00 188 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 SONP18583 2426 aaKnown RBP3.56□□□□□ -1.84
SCN3A-204ENST00000440431 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 SLC25A20O43772 301 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 ZFP36P26651 326 aaKnown RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 PLNP26678 52 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 ERCC8Q13216 396 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 TEX43Q6ZNM6 134 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 WIPF2Q8TF74 440 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 F5H768 121 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 C19orf84I3L1E1 186 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 K7EMI3 77 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 IGHG4P01861 327 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 IGF1P05019 195 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 COL5A1-AS1Q5SY13 56 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 Q71RC1 249 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 IFI27L1Q96BM0 104 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 PAM16Q9Y3D7 125 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 DYSFO75923 2080 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 TRAV2A0A0B4J234 112 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 I3L2K1 104 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 MDKP21741 143 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 EIF4EBP1Q13541 118 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 RHOHQ15669 191 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 OR13C6PQ8NH95 151 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 RNASE8Q8TDE3 154 aaKnown RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 C5orf30Q96GV9 206 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 TPSG1Q9NRR2 321 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 DOCK11Q5JSL3 2073 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 K7EIM0 57 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 M0R2P5 195 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 AZU1P20160 251 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 CKS1BP61024 79 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 BLCAPP62952 87 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 DIAPH2-AS1Q14236 149 aa3.55□□□□□ -1.84
SCN3A-204ENST00000440431 POLR3KQ9Y2Y1 108 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-204ENST00000440431 A0A1W2PPR1 153 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 LGALS9O00182 355 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 DEFB130BP0DP73 79 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 DEFB130AP0DP74 79 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 BRWD1-AS2P59051 145 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 SPINK13Q1W4C9 94 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM141Q96I45 108 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 DNAJC30Q96LL9 226 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 CSTL1Q9H114 145 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 LSM4Q9Y4Z0 139 aaKnown RBP3.54□□□□□ -1.84
SCN3A-204ENST00000440431 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 DNAJC9-AS1A6NH13 148 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 FABP2P12104 132 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 C1orf229Q6ZS94 237 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-204ENST00000440431 C16orf74Q96GX8 76 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 CTSGP08311 255 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 CXCL1P09341 107 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 PAX2Q02962 417 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 Q8TAT8 98 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM243Q9BU79 118 aa3.54□□□□□ -1.84
SCN3A-204ENST00000440431 FNDC4Q9H6D8 234 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-204ENST00000440431 KLK5Q9Y337 293 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-204ENST00000440431 C2orf70A6NJV1 201 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 I3L3M4 83 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 MED14OSP0DP75 135 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 SFTA2Q6UW10 78 aa3.53□□□□□ -1.84
SCN3A-204ENST00000440431 NUP35Q8NFH5 326 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms