RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PKHD1P08F94 4074 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 SERTM2A0A1B0GWG4 89 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 CXorf1O96002 111 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 Q5BKY6 102 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 KCNRGQ8N5I3 272 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 ARL6IP6Q8N6S5 226 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 C5orf17Q8NAS9 161 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 PCNPQ8WW12 178 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 C8orf49Q96NF6 230 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 SPXQ9BT56 116 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 UPK3BQ9BT76 320 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 TNFSF18Q9UNG2 199 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 BOLA1Q9Y3E2 137 aa13.75□□□□□ -0.21
SHROOM1-204ENST00000440118 EIF5AL1Q6IS14 154 aaKnown RBP13.74□□□□□ -0.21
SHROOM1-204ENST00000440118 SGK494Q96LW2 274 aa13.74□□□□□ -0.21
SHROOM1-204ENST00000440118 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
SHROOM1-204ENST00000440118 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
SHROOM1-204ENST00000440118 G3V3Q6 166 aa13.73□□□□□ -0.21
SHROOM1-204ENST00000440118 RPL7L1Q6DKI1 246 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-204ENST00000440118 KIAA1109Q2LD37 5005 aa13.73□□□□□ -0.21
SHROOM1-204ENST00000440118 TCRAP04437 139 aa13.72□□□□□ -0.21
SHROOM1-204ENST00000440118 SFTA3P0C7M3 94 aa13.72□□□□□ -0.21
SHROOM1-204ENST00000440118 TNP2Q05952 138 aa13.72□□□□□ -0.21
SHROOM1-204ENST00000440118 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
SHROOM1-204ENST00000440118 FAM210AQ96ND0 272 aa13.72□□□□□ -0.21
SHROOM1-204ENST00000440118 RNF222A6NCQ9 220 aa13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 BCL2L11O43521 198 aa13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 MED14OSP0DP75 135 aa13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 CRYBA4P53673 196 aa13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 MRPL23Q16540 153 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
SHROOM1-204ENST00000440118 A0A1W2PPQ1 181 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 M0R2P5 195 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 TYMSP04818 313 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 SRIP30626 198 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 SUMO1P63165 101 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 FHL2Q14192 279 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 AKR1C8PQ5T2L2 129 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 RASL10AQ92737 203 aa13.7□□□□□ -0.22
SHROOM1-204ENST00000440118 PKD1P98161 4303 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 IGHV3-16A0A0C4DH30 117 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 GNRH2O43555 120 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 ATP6V1G1O75348 118 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 NXPH4O95158 308 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 PRNTQ86SH4 94 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 ZNF575Q86XF7 245 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 CYB561D1Q8N8Q1 229 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 TVP23CQ96ET8 276 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 ZNF479Q96JC4 524 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 PSG8Q9UQ74 426 aa13.69□□□□□ -0.22
SHROOM1-204ENST00000440118 CTXND1A0A1B0GTU2 59 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 GGTLC3B5MD39 225 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 SIVA1O15304 175 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 GCGP01275 180 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 FLI1Q01543 452 aaPredicted RBP13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 CLLU1Q5K131 121 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
SHROOM1-204ENST00000440118 TRAV4A0A0B4J268 109 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 C16orf90A8MZG2 172 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 C9JCJ5 164 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 GYPEP15421 78 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 SMUG1Q53HV7 270 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 TMEM75Q8N9X5 138 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 EPDR1Q9UM22 224 aa13.67□□□□□ -0.22
SHROOM1-204ENST00000440118 FBLL1A6NHQ2 334 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-204ENST00000440118 ORM1P02763 201 aa13.66□□□□□ -0.22
SHROOM1-204ENST00000440118 PPT1P50897 306 aa13.66□□□□□ -0.22
SHROOM1-204ENST00000440118 UBE2G2P60604 165 aa13.66□□□□□ -0.22
SHROOM1-204ENST00000440118 ZNF471Q9BX82 626 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-204ENST00000440118 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
SHROOM1-204ENST00000440118 PFN1P07737 140 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-204ENST00000440118 FGF8P55075 233 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-204ENST00000440118 STOML3Q8TAV4 291 aa13.65□□□□□ -0.22
SHROOM1-204ENST00000440118 TXNDC17Q9BRA2 123 aa13.65□□□□□ -0.22
SHROOM1-204ENST00000440118 K7EQD1 137 aa13.64□□□□□ -0.23
SHROOM1-204ENST00000440118 SAPCD1Q5SSQ6 148 aa13.64□□□□□ -0.23
SHROOM1-204ENST00000440118 PCLOQ9Y6V0 5065 aa13.64□□□□□ -0.23
SHROOM1-204ENST00000440118 DNAH11Q96DT5 4516 aa13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 BTF3P20290 206 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 ZNF80P51504 273 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 LINC00315P59091 139 aa13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 NHLRC2Q8NBF2 726 aa13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 DYNC1H1Q14204 4646 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-204ENST00000440118 MAP1LC3B2A6NCE7 125 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 LINC00862A6NCI5 91 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 IGLV2-11P01706 119 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 ZNF876PQ49A33 203 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 MAP1LC3BQ9GZQ8 125 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 MED9Q9NWA0 146 aa13.62□□□□□ -0.23
SHROOM1-204ENST00000440118 TRAV34A0A0B4J273 112 aa13.61□□□□□ -0.23
SHROOM1-204ENST00000440118 PEX7O00628 323 aa13.61□□□□□ -0.23
SHROOM1-204ENST00000440118 SPATA12Q7Z6I5 190 aa13.61□□□□□ -0.23
SHROOM1-204ENST00000440118 NKX6-2Q9C056 277 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms