RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
CPSF7-205ENST00000439958 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 AMTP48728 403 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 GFRA4Q9GZZ7 299 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 VWFP04275 2813 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 LGALS9O00182 355 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 NCR2O95944 276 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 COX19Q49B96 90 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
CPSF7-205ENST00000439958 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 AMBPP02760 352 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 K7EQG2 157 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 GNRH2O43555 120 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 STAB1Q9NY15 2570 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 HSBP1O75506 76 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
CPSF7-205ENST00000439958 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
CPSF7-205ENST00000439958 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
CPSF7-205ENST00000439958 H0Y8G0 127 aa11.28□□□□□ -0.6
CPSF7-205ENST00000439958 CD7P09564 240 aa11.28□□□□□ -0.6
CPSF7-205ENST00000439958 S100A8P05109 93 aa11.27□□□□□ -0.6
CPSF7-205ENST00000439958 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.6
CPSF7-205ENST00000439958 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.6
CPSF7-205ENST00000439958 SCGB1D1O95968 90 aa11.27□□□□□ -0.61
CPSF7-205ENST00000439958 ARL6IP6Q8N6S5 226 aa11.27□□□□□ -0.61
CPSF7-205ENST00000439958 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
CPSF7-205ENST00000439958 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 KRTDAPP60985 99 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 Q6AWC8 147 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 EVI2AP22794 236 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 FAM231BA6NCW3 169 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 D6R8Y8 96 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 CKS2P33552 79 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
CPSF7-205ENST00000439958 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 A0A0J9YX75 114 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 PRM2P04554 102 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 ASIPP42127 132 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 TMEM208Q9BTX3 173 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-205ENST00000439958 MGPP08493 103 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 PYY3Q5JQD4 70 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-205ENST00000439958 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
CPSF7-205ENST00000439958 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 PROK1P58294 105 aa11.24□□□□□ -0.61
CPSF7-205ENST00000439958 TRAV26-2A0A0B4J265 109 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 TMEM160Q9NX00 188 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 CDKN1BP46527 198 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
CPSF7-205ENST00000439958 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
CPSF7-205ENST00000439958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-205ENST00000439958 CRLF1O75462 422 aa11.22□□□□□ -0.61
CPSF7-205ENST00000439958 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
CPSF7-205ENST00000439958 C16orf95Q9H693 158 aa11.22□□□□□ -0.61
CPSF7-205ENST00000439958 C7orf71A4D174 169 aa11.21□□□□□ -0.61
CPSF7-205ENST00000439958 CBY3A6NI87 242 aa11.21□□□□□ -0.61
CPSF7-205ENST00000439958 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-205ENST00000439958 TSPOP30536 169 aa11.21□□□□□ -0.61
CPSF7-205ENST00000439958 NIT1Q86X76 327 aa11.21□□□□□ -0.61
CPSF7-205ENST00000439958 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-205ENST00000439958 F5H697 171 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 STHQ8IWL8 128 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.62
CPSF7-205ENST00000439958 IGLC6P0CF74 106 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 LEPP41159 167 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 FA2HQ7L5A8 372 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.62
CPSF7-205ENST00000439958 LINC00310P59036 64 aa11.2□□□□□ -0.62
CPSF7-205ENST00000439958 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
CPSF7-205ENST00000439958 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
CPSF7-205ENST00000439958 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
CPSF7-205ENST00000439958 SMIM6P0DI80 62 aa11.2□□□□□ -0.62
CPSF7-205ENST00000439958 RPL35AP18077 110 aaKnown RBP11.2□□□□□ -0.62
CPSF7-205ENST00000439958 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
CPSF7-205ENST00000439958 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 ORMDL3Q8N138 153 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 CTRLP40313 264 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms