RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CRYBA4P53673 196 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 ADORA2A-AS1P86434 159 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 C15orf32Q32M92 178 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 IL17RELQ6ZVW7 336 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZNF492Q9P255 531 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 TRBV20-1A0A075B6N2 111 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGF2-ASQ6U949 168 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 MTORP42345 2549 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 NDUFS8O00217 210 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 ATP6V0BQ99437 205 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 BSNQ9UPA5 3926 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR11H12B2RN74 326 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 I3L2K1 104 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZFP2Q6ZN57 461 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR11H1Q8NG94 326 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR9G4Q8NGQ1 327 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR11H2Q8NH07 326 aa7.73□□□□□ -1.17
CDC42SE1-202ENST00000439374 DPM2O94777 84 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 SIGLEC15Q6ZMC9 328 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGLL5B9A064 214 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 MYCNOSP40205 109 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 C12orf74Q32Q52 190 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 FAM74A4Q5TZK3 123 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 SOX21Q9Y651 276 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 FSTL3O95633 263 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 GNLYP22749 145 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 MRGPRG-AS1Q2M3A8 158 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
CDC42SE1-202ENST00000439374 SAA4P35542 130 aa7.71□□□□□ -1.17
CDC42SE1-202ENST00000439374 LINC00477Q96M19 166 aa7.71□□□□□ -1.17
CDC42SE1-202ENST00000439374 SHANK2-AS3Q9BTD1 123 aa7.71□□□□□ -1.17
CDC42SE1-202ENST00000439374 A0A1W2PPR1 153 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 ZNF815PA8K554 130 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 LGALS9BQ3B8N2 356 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 LGALS9CQ6DKI2 356 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 DTX2Q86UW9 622 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 SCGB3A1Q96QR1 104 aa7.71□□□□□ -1.18
CDC42SE1-202ENST00000439374 FN1P02751 2386 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 ODF1Q14990 250 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 ZNF562Q6V9R5 426 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 CEND1Q8N111 149 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 ACANP16112 2415 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 B5MCH6 92 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 TNFRSF13BO14836 293 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 IGF1P05019 195 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 CFHR4Q92496 578 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 NRGNQ92686 78 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 PRR25Q96S07 402 aa7.7□□□□□ -1.18
CDC42SE1-202ENST00000439374 IGHV4-39P01824 125 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 PF4V1P10720 104 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 SLC25A16P16260 332 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 SPANXB1Q9NS25 103 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 CRYGCP07315 174 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 MSRB2Q9Y3D2 182 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 HRNRQ86YZ3 2850 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 PRSS2P07478 247 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 GFRA4Q9GZZ7 299 aa7.69□□□□□ -1.18
CDC42SE1-202ENST00000439374 UTP20O75691 2785 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 CT83Q5H943 113 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 PRSS29PA6NIE9 313 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 HOXA3O43365 443 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 RNF183Q96D59 192 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 C16orf92Q96LL3 132 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 ZNF256Q9Y2P7 627 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 WI2-2373I1.2A0A1W2PRP0 233 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 F6UB75 175 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 PVRIGQ6DKI7 326 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
CDC42SE1-202ENST00000439374 CRYGBP07316 175 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 FOXI2Q6ZQN5 318 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 PLEKHB2Q96CS7 222 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 TRAV8-2A0A0B4J237 113 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 IGKV3D-20A0A0C4DH25 116 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 H3BRN7 92 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 C19orf84I3L1E1 186 aa7.67□□□□□ -1.18
CDC42SE1-202ENST00000439374 A0A087WWL8 130 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 BMI1P35226 326 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 DUX5Q96PT3 197 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 IGHV7-81A0A0B4J1V7 117 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 FABP5P3A8MUU1 101 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 ATP5J2P56134 94 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 PRADC1Q9BSG0 188 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 CHTOPQ9Y3Y2 248 aaKnown RBP7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 CTSGP08311 255 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 RNASE13Q5GAN3 156 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms