RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PLNP26678 52 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 PRR30Q53SZ7 412 aaPredicted RBP12.37□□□□□ -0.43
DHFR-201ENST00000439211 CENPVL3A0A0U1RRI6 287 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 ADGRG4Q8IZF6 3080 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 EFNA4P52798 201 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 SHISA9B4DS77 424 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 CEACAM4O75871 244 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 RUSC1-AS1Q66K80 236 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 ZNF785A8K8V0 405 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 PRSS33Q8NF86 280 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 CFAP47Q6ZTR5 3102 aa12.36□□□□□ -0.43
DHFR-201ENST00000439211 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 GATA1P15976 413 aaPredicted RBP12.35□□□□□ -0.43
DHFR-201ENST00000439211 A0A087WX48 190 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 SRD5A1P18405 259 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
DHFR-201ENST00000439211 RNF125Q96EQ8 232 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 ZFHX4Q86UP3 3567 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 CGB1A6NKQ9 187 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 SLC25A16P16260 332 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
DHFR-201ENST00000439211 CSDC2Q9Y534 153 aaKnown RBP12.34□□□□□ -0.43
DHFR-201ENST00000439211 LINC00694P0DN24 101 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 PRADC1Q9BSG0 188 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 DMXL2Q8TDJ6 3036 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 B9A039 149 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 H7C1H1 209 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 PMVKQ15126 192 aa12.34□□□□□ -0.43
DHFR-201ENST00000439211 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.43
DHFR-201ENST00000439211 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.43
DHFR-201ENST00000439211 THBDP07204 575 aa12.33□□□□□ -0.43
DHFR-201ENST00000439211 IGFL4Q6B9Z1 124 aa12.33□□□□□ -0.43
DHFR-201ENST00000439211 SH2D1AO60880 128 aa12.33□□□□□ -0.44
DHFR-201ENST00000439211 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.44
DHFR-201ENST00000439211 LAGE3Q14657 143 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 Q71RC1 249 aaPredicted RBP12.32□□□□□ -0.44
DHFR-201ENST00000439211 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
DHFR-201ENST00000439211 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 CUL9Q8IWT3 2517 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 LINC00311Q8N616 119 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
DHFR-201ENST00000439211 GP9P14770 177 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 MFAP4P55083 255 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 ECSCRQ19T08 205 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 FAM236AA0A1B0GUQ0 79 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 FAM236BA0A1B0GV22 79 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 H3BMM0 161 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 Q8N1Y9 231 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
DHFR-201ENST00000439211 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
DHFR-201ENST00000439211 TMEM170BQ5T4T1 132 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 Q8TAT8 98 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 TMEM101Q96IK0 257 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 C21orf62Q9NYP8 219 aa12.31□□□□□ -0.44
DHFR-201ENST00000439211 DCHS1Q96JQ0 3298 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 CCL21O00585 134 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 KLHL30-AS1Q8NEE0 82 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 F8VRH5 84 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 J3KT08 172 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 NBR2O15453 112 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 PRSS2P07478 247 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 TCF15Q12870 199 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
DHFR-201ENST00000439211 NPFFO15130 113 aa12.29□□□□□ -0.44
DHFR-201ENST00000439211 CD7P09564 240 aa12.29□□□□□ -0.44
DHFR-201ENST00000439211 LGALS1P09382 135 aaKnown RBP12.29□□□□□ -0.44
DHFR-201ENST00000439211 ZNF672Q499Z4 452 aaPredicted RBP12.29□□□□□ -0.44
DHFR-201ENST00000439211 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 MYCNOSP40205 109 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 IGKV1-17P01599 117 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 PIFOQ8TCI5 191 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 PTPRBP23467 1997 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
DHFR-201ENST00000439211 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.44
DHFR-201ENST00000439211 NRGNQ92686 78 aa12.27□□□□□ -0.44
DHFR-201ENST00000439211 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
DHFR-201ENST00000439211 RPL11P62913 178 aaKnown RBP12.27□□□□□ -0.45
DHFR-201ENST00000439211 SHANK2-AS3Q9BTD1 123 aa12.27□□□□□ -0.45
DHFR-201ENST00000439211 COX6CP09669 75 aa12.27□□□□□ -0.45
DHFR-201ENST00000439211 ATXN8Q156A1 80 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms